JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3f6ya_.name2015-04-17 17:40 0 Job name flag file
[ ]jp_G891lFA.align2015-04-17 20:55 40KPSIBLAST alignment in FASTA format
[TXT]jp_G891lFA.als2015-04-17 20:55 3.5KAlscript command file for PS/PDF output
[ ]jp_G891lFA.blast.gz2015-04-17 20:55 157KCompressed PSIBLAST output file
[TXT]jp_G891lFA.coils.csv2015-04-17 20:55 1.4KCOILS output in CSV format
[ ]jp_G891lFA.coilseq.lupas_142015-04-17 20:55 9.9KCOILS output, window length 14
[ ]jp_G891lFA.coilseq.lupas_212015-04-17 20:55 9.9KCOILS output, window length 21
[ ]jp_G891lFA.coilseq.lupas_282015-04-17 20:55 9.9KCOILS output, window length 28
[ ]jp_G891lFA.concise2015-04-17 20:55 88KPrediction: coiled-coil, solvent, alignment
[ ]jp_G891lFA.concise.blc2015-04-17 20:55 43KBLC format prediction and alignment data
[ ]jp_G891lFA.concise.fasta2015-04-17 20:55 43KPrediction: coiled-coil, solvent, alignment
[ ]jp_G891lFA.concise.pdf2015-04-17 20:55 272KPDF prediction and alignment data
[ ]jp_G891lFA.concise.ps2015-04-17 20:55 5.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_G891lFA.fasta2015-04-17 19:00 251 Input query sequence in FASTA format
[ ]jp_G891lFA.full_MSA.fasta2015-04-17 20:55 243KFull MSA before JPred filters in FASTA
[TXT]jp_G891lFA.full_MSA.fasta.noGaps.html2015-04-17 20:55 111KFull MSA before JPred filters in FASTA
[TXT]jp_G891lFA.full_MSA.fasta.withGaps.html2015-04-17 20:55 1.0MFull MSA before JPred filters in FASTA
[ ]jp_G891lFA.hmm2015-04-17 20:55 44KHHMer2 profile of the alignment
[TXT]jp_G891lFA.html2015-04-17 20:55 92KHTML prediction and alignment data
[ ]jp_G891lFA.input2015-04-17 17:40 242 Raw input data for analysis
[ ]jp_G891lFA.jalview2015-04-17 20:55 5.5KJalview annotation file for alignment
[ ]jp_G891lFA.jnet2015-04-17 20:55 8.6KJnet secondary structure output
[TXT]jp_G891lFA.profile2015-04-17 20:47 38KPSIBLAST profile from alignment
[ ]jp_G891lFA.pssm2015-04-17 20:55 50KPSIBLAST PSSM for Jnet
[TXT]jp_G891lFA.results.html2016-02-15 12:21 102KJPred results page
[TXT]jp_G891lFA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_G891lFA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_G891lFA.seq2015-04-17 17:40 251 Sequence data file
[TXT]jp_G891lFA.simple.html2015-04-17 20:55 1.7KBrief HTML: sequence and prediction only
[TXT]jp_G891lFA.svg.html2015-04-17 20:55 94KJalview SVG summary of results
[ ]jp_G891lFA.tar.gz2015-04-17 20:55 632KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.