JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3g91a_.name2015-04-17 18:15 0 Job name flag file
[ ]jp_XRYd1Hg.align2015-04-17 20:11 243KPSIBLAST alignment in FASTA format
[TXT]jp_XRYd1Hg.als2015-04-17 20:11 4.0KAlscript command file for PS/PDF output
[ ]jp_XRYd1Hg.blast.gz2015-04-17 20:09 14MCompressed PSIBLAST output file
[TXT]jp_XRYd1Hg.coils.csv2015-04-17 20:11 1.6KCOILS output in CSV format
[ ]jp_XRYd1Hg.coilseq.lupas_142015-04-17 20:11 11KCOILS output, window length 14
[ ]jp_XRYd1Hg.coilseq.lupas_212015-04-17 20:11 11KCOILS output, window length 21
[ ]jp_XRYd1Hg.coilseq.lupas_282015-04-17 20:11 11KCOILS output, window length 28
[ ]jp_XRYd1Hg.concise2015-04-17 20:11 481KPrediction: coiled-coil, solvent, alignment
[ ]jp_XRYd1Hg.concise.blc2015-04-17 20:11 243KBLC format prediction and alignment data
[ ]jp_XRYd1Hg.concise.fasta2015-04-17 20:11 245KPrediction: coiled-coil, solvent, alignment
[ ]jp_XRYd1Hg.concise.pdf2015-04-17 20:12 1.7MPDF prediction and alignment data
[ ]jp_XRYd1Hg.concise.ps2015-04-17 20:11 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_XRYd1Hg.fasta2015-04-17 20:01 276 Input query sequence in FASTA format
[ ]jp_XRYd1Hg.full_MSA.fasta2015-04-17 20:11 26MFull MSA before JPred filters in FASTA
[TXT]jp_XRYd1Hg.full_MSA.fasta.noGaps.html2015-04-17 20:12 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_XRYd1Hg.full_MSA.fasta.withGaps.html2015-04-17 20:12 59MFull MSA before JPred filters in FASTA
[ ]jp_XRYd1Hg.hmm2015-04-17 20:11 49KHHMer2 profile of the alignment
[TXT]jp_XRYd1Hg.html2015-04-17 20:11 433KHTML prediction and alignment data
[ ]jp_XRYd1Hg.input2015-04-17 18:15 267 Raw input data for analysis
[ ]jp_XRYd1Hg.jalview2015-04-17 20:11 6.0KJalview annotation file for alignment
[ ]jp_XRYd1Hg.jnet2015-04-17 20:11 9.5KJnet secondary structure output
[TXT]jp_XRYd1Hg.profile2015-04-17 20:07 42KPSIBLAST profile from alignment
[ ]jp_XRYd1Hg.pssm2015-04-17 20:11 56KPSIBLAST PSSM for Jnet
[TXT]jp_XRYd1Hg.results.html2016-02-15 12:21 114KJPred results page
[TXT]jp_XRYd1Hg.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_XRYd1Hg.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_XRYd1Hg.seq2015-04-17 18:15 276 Sequence data file
[TXT]jp_XRYd1Hg.simple.html2015-04-17 20:11 1.9KBrief HTML: sequence and prediction only
[TXT]jp_XRYd1Hg.svg.html2015-04-17 20:13 106KJalview SVG summary of results
[ ]jp_XRYd1Hg.tar.gz2015-04-17 20:13 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.