A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:05 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3gwkc_.name | 2015-04-17 18:15 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_pVGMVml.align | 2015-04-17 20:05 | 80K | PSIBLAST alignment in FASTA format |
| jp_pVGMVml.als | 2015-04-17 20:05 | 1.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_pVGMVml.blast.gz | 2015-04-17 20:05 | 164K | Compressed PSIBLAST output file |
| jp_pVGMVml.coils.csv | 2015-04-17 20:05 | 618 | COILS output in CSV format |
| jp_pVGMVml.coilseq.lupas_14 | 2015-04-17 20:05 | 4.1K | COILS output, window length 14 |
| jp_pVGMVml.coilseq.lupas_21 | 2015-04-17 20:05 | 4.1K | COILS output, window length 21 |
| jp_pVGMVml.coilseq.lupas_28 | 2015-04-17 20:05 | 4.1K | COILS output, window length 28 |
| jp_pVGMVml.concise | 2015-04-17 20:05 | 154K | Prediction: coiled-coil, solvent, alignment |
| jp_pVGMVml.concise.blc | 2015-04-17 20:05 | 80K | BLC format prediction and alignment data |
| jp_pVGMVml.concise.fasta | 2015-04-17 20:05 | 81K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_pVGMVml.concise.pdf | 2015-04-17 20:05 | 480K | PDF prediction and alignment data |
| jp_pVGMVml.concise.ps | 2015-04-17 20:05 | 8.8M | Prediction: coiled-coil, solvent, alignment |
| jp_pVGMVml.fasta | 2015-04-17 20:02 | 112 | Input query sequence in FASTA format |
| jp_pVGMVml.full_MSA.fasta | 2015-04-17 20:05 | 184K | Full MSA before JPred filters in FASTA |
| jp_pVGMVml.full_MSA.fasta.noGaps.html | 2015-04-17 20:05 | 234K | Full MSA before JPred filters in FASTA |
| jp_pVGMVml.full_MSA.fasta.withGaps.html | 2015-04-17 20:05 | 1.1M | Full MSA before JPred filters in FASTA |
| jp_pVGMVml.hmm | 2015-04-17 20:05 | 18K | HHMer2 profile of the alignment |
| jp_pVGMVml.html | 2015-04-17 20:05 | 224K | HTML prediction and alignment data |
| jp_pVGMVml.input | 2015-04-17 18:15 | 105 | Raw input data for analysis |
| jp_pVGMVml.jalview | 2015-04-17 20:05 | 2.9K | Jalview annotation file for alignment |
| jp_pVGMVml.jnet | 2015-04-17 20:05 | 3.7K | Jnet secondary structure output |
| jp_pVGMVml.profile | 2015-04-17 20:04 | 16K | PSIBLAST profile from alignment |
| jp_pVGMVml.pssm | 2015-04-17 20:05 | 21K | PSIBLAST PSSM for Jnet |
| jp_pVGMVml.results.html | 2016-02-15 12:21 | 47K | JPred results page |
| jp_pVGMVml.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_pVGMVml.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_pVGMVml.seq | 2015-04-17 18:15 | 112 | Sequence data file |
| jp_pVGMVml.simple.html | 2015-04-17 20:05 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_pVGMVml.svg.html) | jp_pVGMVml.svg.html | 2015-04-17 20:05 | 39K | Jalview SVG summary of results |
| jp_pVGMVml.tar.gz | 2015-04-17 20:05 | 969K | Archive containing complete results |
