JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:08 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3klra_.name2015-04-17 17:41 0 Job name flag file
[ ]jp_rIdhcen.align2015-04-17 19:08 130KPSIBLAST alignment in FASTA format
[TXT]jp_rIdhcen.als2015-04-17 19:08 3.1KAlscript command file for PS/PDF output
[ ]jp_rIdhcen.blast.gz2015-04-17 19:07 1.7MCompressed PSIBLAST output file
[TXT]jp_rIdhcen.coils.csv2015-04-17 19:08 780 COILS output in CSV format
[ ]jp_rIdhcen.coilseq.lupas_142015-04-17 19:08 5.2KCOILS output, window length 14
[ ]jp_rIdhcen.coilseq.lupas_212015-04-17 19:08 5.2KCOILS output, window length 21
[ ]jp_rIdhcen.coilseq.lupas_282015-04-17 19:08 5.2KCOILS output, window length 28
[ ]jp_rIdhcen.concise2015-04-17 19:08 253KPrediction: coiled-coil, solvent, alignment
[ ]jp_rIdhcen.concise.blc2015-04-17 19:08 130KBLC format prediction and alignment data
[ ]jp_rIdhcen.concise.fasta2015-04-17 19:08 131KPrediction: coiled-coil, solvent, alignment
[ ]jp_rIdhcen.concise.pdf2015-04-17 19:08 854KPDF prediction and alignment data
[ ]jp_rIdhcen.concise.ps2015-04-17 19:08 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_rIdhcen.fasta2015-04-17 19:02 139 Input query sequence in FASTA format
[ ]jp_rIdhcen.full_MSA.fasta2015-04-17 19:08 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_rIdhcen.full_MSA.fasta.noGaps.html2015-04-17 19:08 959KFull MSA before JPred filters in FASTA
[TXT]jp_rIdhcen.full_MSA.fasta.withGaps.html2015-04-17 19:08 11MFull MSA before JPred filters in FASTA
[ ]jp_rIdhcen.hmm2015-04-17 19:08 23KHHMer2 profile of the alignment
[TXT]jp_rIdhcen.html2015-04-17 19:08 317KHTML prediction and alignment data
[ ]jp_rIdhcen.input2015-04-17 17:41 132 Raw input data for analysis
[ ]jp_rIdhcen.jalview2015-04-17 19:08 3.3KJalview annotation file for alignment
[ ]jp_rIdhcen.jnet2015-04-17 19:08 4.6KJnet secondary structure output
[TXT]jp_rIdhcen.profile2015-04-17 19:05 20KPSIBLAST profile from alignment
[ ]jp_rIdhcen.pssm2015-04-17 19:08 27KPSIBLAST PSSM for Jnet
[TXT]jp_rIdhcen.results.html2016-02-15 12:21 62KJPred results page
[TXT]jp_rIdhcen.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_rIdhcen.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_rIdhcen.seq2015-04-17 17:41 139 Sequence data file
[TXT]jp_rIdhcen.simple.html2015-04-17 19:08 1.4KBrief HTML: sequence and prediction only
[TXT]jp_rIdhcen.svg.html2015-04-17 19:08 53KJalview SVG summary of results
[ ]jp_rIdhcen.tar.gz2015-04-17 19:08 3.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.