JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3kwda_.name2015-04-17 18:53 0 Job name flag file
[ ]jp_ZIX9PXC.align2015-04-17 21:11 171KPSIBLAST alignment in FASTA format
[TXT]jp_ZIX9PXC.als2015-04-17 21:11 4.2KAlscript command file for PS/PDF output
[ ]jp_ZIX9PXC.blast.gz2015-04-17 21:09 12MCompressed PSIBLAST output file
[TXT]jp_ZIX9PXC.coils.csv2015-04-17 21:11 1.0KCOILS output in CSV format
[ ]jp_ZIX9PXC.coilseq.lupas_142015-04-17 21:11 7.0KCOILS output, window length 14
[ ]jp_ZIX9PXC.coilseq.lupas_212015-04-17 21:11 7.0KCOILS output, window length 21
[ ]jp_ZIX9PXC.coilseq.lupas_282015-04-17 21:11 7.0KCOILS output, window length 28
[ ]jp_ZIX9PXC.concise2015-04-17 21:11 334KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZIX9PXC.concise.blc2015-04-17 21:11 171KBLC format prediction and alignment data
[ ]jp_ZIX9PXC.concise.fasta2015-04-17 21:11 173KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZIX9PXC.concise.pdf2015-04-17 21:11 1.2MPDF prediction and alignment data
[ ]jp_ZIX9PXC.concise.ps2015-04-17 21:11 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_ZIX9PXC.fasta2015-04-17 20:59 181 Input query sequence in FASTA format
[ ]jp_ZIX9PXC.full_MSA.fasta2015-04-17 21:10 30MFull MSA before JPred filters in FASTA
[TXT]jp_ZIX9PXC.full_MSA.fasta.noGaps.html2015-04-17 21:12 3.2MFull MSA before JPred filters in FASTA
[TXT]jp_ZIX9PXC.full_MSA.fasta.withGaps.html2015-04-17 21:12 74MFull MSA before JPred filters in FASTA
[ ]jp_ZIX9PXC.hmm2015-04-17 21:11 31KHHMer2 profile of the alignment
[TXT]jp_ZIX9PXC.html2015-04-17 21:11 363KHTML prediction and alignment data
[ ]jp_ZIX9PXC.input2015-04-17 18:53 173 Raw input data for analysis
[ ]jp_ZIX9PXC.jalview2015-04-17 21:11 4.1KJalview annotation file for alignment
[ ]jp_ZIX9PXC.jnet2015-04-17 21:11 6.1KJnet secondary structure output
[TXT]jp_ZIX9PXC.profile2015-04-17 21:07 27KPSIBLAST profile from alignment
[ ]jp_ZIX9PXC.pssm2015-04-17 21:11 36KPSIBLAST PSSM for Jnet
[TXT]jp_ZIX9PXC.results.html2016-02-15 12:21 79KJPred results page
[TXT]jp_ZIX9PXC.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ZIX9PXC.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ZIX9PXC.seq2015-04-17 18:53 181 Sequence data file
[TXT]jp_ZIX9PXC.simple.html2015-04-17 21:11 1.7KBrief HTML: sequence and prediction only
[TXT]jp_ZIX9PXC.svg.html2015-04-17 21:12 71KJalview SVG summary of results
[ ]jp_ZIX9PXC.tar.gz2015-04-17 21:12 21MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.