JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:43 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3l8wa1.name2015-04-17 19:29 0 Job name flag file
[ ]jp_UHgkCVH.align2015-04-17 22:42 51KPSIBLAST alignment in FASTA format
[TXT]jp_UHgkCVH.als2015-04-17 22:42 2.5KAlscript command file for PS/PDF output
[ ]jp_UHgkCVH.blast.gz2015-04-17 22:42 251KCompressed PSIBLAST output file
[TXT]jp_UHgkCVH.coils.csv2015-04-17 22:42 846 COILS output in CSV format
[ ]jp_UHgkCVH.coilseq.lupas_142015-04-17 22:42 5.7KCOILS output, window length 14
[ ]jp_UHgkCVH.coilseq.lupas_212015-04-17 22:42 5.7KCOILS output, window length 21
[ ]jp_UHgkCVH.coilseq.lupas_282015-04-17 22:42 5.7KCOILS output, window length 28
[ ]jp_UHgkCVH.concise2015-04-17 22:42 103KPrediction: coiled-coil, solvent, alignment
[ ]jp_UHgkCVH.concise.blc2015-04-17 22:42 53KBLC format prediction and alignment data
[ ]jp_UHgkCVH.concise.fasta2015-04-17 22:42 53KPrediction: coiled-coil, solvent, alignment
[ ]jp_UHgkCVH.concise.pdf2015-04-17 22:43 349KPDF prediction and alignment data
[ ]jp_UHgkCVH.concise.ps2015-04-17 22:42 6.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_UHgkCVH.fasta2015-04-17 22:06 150 Input query sequence in FASTA format
[ ]jp_UHgkCVH.full_MSA.fasta2015-04-17 22:42 263KFull MSA before JPred filters in FASTA
[TXT]jp_UHgkCVH.full_MSA.fasta.noGaps.html2015-04-17 22:43 158KFull MSA before JPred filters in FASTA
[TXT]jp_UHgkCVH.full_MSA.fasta.withGaps.html2015-04-17 22:43 1.1MFull MSA before JPred filters in FASTA
[ ]jp_UHgkCVH.hmm2015-04-17 22:42 26KHHMer2 profile of the alignment
[TXT]jp_UHgkCVH.html2015-04-17 22:42 129KHTML prediction and alignment data
[ ]jp_UHgkCVH.input2015-04-17 19:29 143 Raw input data for analysis
[ ]jp_UHgkCVH.jalview2015-04-17 22:42 3.6KJalview annotation file for alignment
[ ]jp_UHgkCVH.jnet2015-04-17 22:42 5.0KJnet secondary structure output
[TXT]jp_UHgkCVH.profile2015-04-17 22:38 22KPSIBLAST profile from alignment
[ ]jp_UHgkCVH.pssm2015-04-17 22:42 29KPSIBLAST PSSM for Jnet
[TXT]jp_UHgkCVH.results.html2016-02-15 12:21 63KJPred results page
[TXT]jp_UHgkCVH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_UHgkCVH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_UHgkCVH.seq2015-04-17 19:29 150 Sequence data file
[TXT]jp_UHgkCVH.simple.html2015-04-17 22:42 1.3KBrief HTML: sequence and prediction only
[TXT]jp_UHgkCVH.svg.html2015-04-17 22:43 55KJalview SVG summary of results
[ ]jp_UHgkCVH.tar.gz2015-04-17 22:43 833KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.