JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3llpa1.name2015-04-17 15:49 0 Job name flag file
[ ]jp_EwU83bP.align2015-04-17 16:06 213KPSIBLAST alignment in FASTA format
[TXT]jp_EwU83bP.als2015-04-17 16:06 3.2KAlscript command file for PS/PDF output
[ ]jp_EwU83bP.blast.gz2015-04-17 16:04 602KCompressed PSIBLAST output file
[TXT]jp_EwU83bP.coils.csv2015-04-17 16:06 804 COILS output in CSV format
[ ]jp_EwU83bP.coilseq.lupas_142015-04-17 16:06 5.4KCOILS output, window length 14
[ ]jp_EwU83bP.coilseq.lupas_212015-04-17 16:06 5.4KCOILS output, window length 21
[ ]jp_EwU83bP.coilseq.lupas_282015-04-17 16:06 5.4KCOILS output, window length 28
[ ]jp_EwU83bP.concise2015-04-17 16:06 412KPrediction: coiled-coil, solvent, alignment
[ ]jp_EwU83bP.concise.blc2015-04-17 16:06 212KBLC format prediction and alignment data
[ ]jp_EwU83bP.concise.fasta2015-04-17 16:06 215KPrediction: coiled-coil, solvent, alignment
[ ]jp_EwU83bP.concise.pdf2015-04-17 16:07 1.1MPDF prediction and alignment data
[ ]jp_EwU83bP.concise.ps2015-04-17 16:06 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_EwU83bP.fasta2015-04-17 16:02 143 Input query sequence in FASTA format
[ ]jp_EwU83bP.full_MSA.fasta2015-04-17 16:05 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_EwU83bP.full_MSA.fasta.noGaps.html2015-04-17 16:07 507KFull MSA before JPred filters in FASTA
[TXT]jp_EwU83bP.full_MSA.fasta.withGaps.html2015-04-17 16:07 8.3MFull MSA before JPred filters in FASTA
[ ]jp_EwU83bP.hmm2015-04-17 16:06 24KHHMer2 profile of the alignment
[TXT]jp_EwU83bP.html2015-04-17 16:06 505KHTML prediction and alignment data
[ ]jp_EwU83bP.input2015-04-17 15:49 136 Raw input data for analysis
[ ]jp_EwU83bP.jalview2015-04-17 16:06 3.4KJalview annotation file for alignment
[ ]jp_EwU83bP.jnet2015-04-17 16:06 4.8KJnet secondary structure output
[TXT]jp_EwU83bP.profile2015-04-17 16:04 21KPSIBLAST profile from alignment
[ ]jp_EwU83bP.pssm2015-04-17 16:06 28KPSIBLAST PSSM for Jnet
[TXT]jp_EwU83bP.results.html2016-02-15 12:21 61KJPred results page
[TXT]jp_EwU83bP.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EwU83bP.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EwU83bP.seq2015-04-17 15:49 143 Sequence data file
[TXT]jp_EwU83bP.simple.html2015-04-17 16:06 1.4KBrief HTML: sequence and prediction only
[TXT]jp_EwU83bP.svg.html2015-04-17 16:07 53KJalview SVG summary of results
[ ]jp_EwU83bP.tar.gz2015-04-17 16:07 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.