JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:10 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3lyea_.name2015-04-17 15:49 0 Job name flag file
[ ]jp_s48WLuT.align2015-04-17 16:09 227KPSIBLAST alignment in FASTA format
[TXT]jp_s48WLuT.als2015-04-17 16:09 4.4KAlscript command file for PS/PDF output
[ ]jp_s48WLuT.blast.gz2015-04-17 16:08 6.5MCompressed PSIBLAST output file
[TXT]jp_s48WLuT.coils.csv2015-04-17 16:09 1.7KCOILS output in CSV format
[ ]jp_s48WLuT.coilseq.lupas_142015-04-17 16:09 12KCOILS output, window length 14
[ ]jp_s48WLuT.coilseq.lupas_212015-04-17 16:09 12KCOILS output, window length 21
[ ]jp_s48WLuT.coilseq.lupas_282015-04-17 16:09 12KCOILS output, window length 28
[ ]jp_s48WLuT.concise2015-04-17 16:09 453KPrediction: coiled-coil, solvent, alignment
[ ]jp_s48WLuT.concise.blc2015-04-17 16:09 228KBLC format prediction and alignment data
[ ]jp_s48WLuT.concise.fasta2015-04-17 16:09 230KPrediction: coiled-coil, solvent, alignment
[ ]jp_s48WLuT.concise.pdf2015-04-17 16:10 1.5MPDF prediction and alignment data
[ ]jp_s48WLuT.concise.ps2015-04-17 16:09 28MPrediction: coiled-coil, solvent, alignment
[ ]jp_s48WLuT.fasta2015-04-17 16:03 301 Input query sequence in FASTA format
[ ]jp_s48WLuT.full_MSA.fasta2015-04-17 16:09 15MFull MSA before JPred filters in FASTA
[TXT]jp_s48WLuT.full_MSA.fasta.noGaps.html2015-04-17 16:10 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_s48WLuT.full_MSA.fasta.withGaps.html2015-04-17 16:10 45MFull MSA before JPred filters in FASTA
[ ]jp_s48WLuT.hmm2015-04-17 16:09 53KHHMer2 profile of the alignment
[TXT]jp_s48WLuT.html2015-04-17 16:09 401KHTML prediction and alignment data
[ ]jp_s48WLuT.input2015-04-17 15:49 292 Raw input data for analysis
[ ]jp_s48WLuT.jalview2015-04-17 16:09 6.6KJalview annotation file for alignment
[ ]jp_s48WLuT.jnet2015-04-17 16:09 10KJnet secondary structure output
[TXT]jp_s48WLuT.profile2015-04-17 16:06 46KPSIBLAST profile from alignment
[ ]jp_s48WLuT.pssm2015-04-17 16:09 61KPSIBLAST PSSM for Jnet
[TXT]jp_s48WLuT.results.html2016-02-15 12:21 125KJPred results page
[TXT]jp_s48WLuT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_s48WLuT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_s48WLuT.seq2015-04-17 15:49 301 Sequence data file
[TXT]jp_s48WLuT.simple.html2015-04-17 16:09 2.0KBrief HTML: sequence and prediction only
[TXT]jp_s48WLuT.svg.html2015-04-17 16:10 116KJalview SVG summary of results
[ ]jp_s48WLuT.tar.gz2015-04-17 16:10 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.