JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:10 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3nfta_.name2015-04-17 17:41 0 Job name flag file
[ ]jp_Nv0LxWH.align2015-04-17 19:10 19KPSIBLAST alignment in FASTA format
[TXT]jp_Nv0LxWH.als2015-04-17 19:10 3.1KAlscript command file for PS/PDF output
[ ]jp_Nv0LxWH.blast.gz2015-04-17 19:10 65KCompressed PSIBLAST output file
[TXT]jp_Nv0LxWH.coils.csv2015-04-17 19:10 1.6KCOILS output in CSV format
[ ]jp_Nv0LxWH.coilseq.lupas_142015-04-17 19:10 11KCOILS output, window length 14
[ ]jp_Nv0LxWH.coilseq.lupas_212015-04-17 19:10 11KCOILS output, window length 21
[ ]jp_Nv0LxWH.coilseq.lupas_282015-04-17 19:10 11KCOILS output, window length 28
[ ]jp_Nv0LxWH.concise2015-04-17 19:10 47KPrediction: coiled-coil, solvent, alignment
[ ]jp_Nv0LxWH.concise.blc2015-04-17 19:10 22KBLC format prediction and alignment data
[ ]jp_Nv0LxWH.concise.fasta2015-04-17 19:10 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_Nv0LxWH.concise.pdf2015-04-17 19:10 138KPDF prediction and alignment data
[ ]jp_Nv0LxWH.concise.ps2015-04-17 19:10 2.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_Nv0LxWH.fasta2015-04-17 19:03 278 Input query sequence in FASTA format
[ ]jp_Nv0LxWH.full_MSA.fasta2015-04-17 19:10 124KFull MSA before JPred filters in FASTA
[TXT]jp_Nv0LxWH.full_MSA.fasta.noGaps.html2015-04-17 19:10 37KFull MSA before JPred filters in FASTA
[TXT]jp_Nv0LxWH.full_MSA.fasta.withGaps.html2015-04-17 19:10 396KFull MSA before JPred filters in FASTA
[ ]jp_Nv0LxWH.hmm2015-04-17 19:10 49KHHMer2 profile of the alignment
[TXT]jp_Nv0LxWH.html2015-04-17 19:10 59KHTML prediction and alignment data
[ ]jp_Nv0LxWH.input2015-04-17 17:41 269 Raw input data for analysis
[ ]jp_Nv0LxWH.jalview2015-04-17 19:10 6.2KJalview annotation file for alignment
[ ]jp_Nv0LxWH.jnet2015-04-17 19:10 9.6KJnet secondary structure output
[TXT]jp_Nv0LxWH.profile2015-04-17 19:08 42KPSIBLAST profile from alignment
[ ]jp_Nv0LxWH.pssm2015-04-17 19:10 56KPSIBLAST PSSM for Jnet
[TXT]jp_Nv0LxWH.results.html2016-02-15 12:21 112KJPred results page
[TXT]jp_Nv0LxWH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Nv0LxWH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Nv0LxWH.seq2015-04-17 17:41 278 Sequence data file
[TXT]jp_Nv0LxWH.simple.html2015-04-17 19:10 1.7KBrief HTML: sequence and prediction only
[TXT]jp_Nv0LxWH.svg.html2015-04-17 19:10 104KJalview SVG summary of results
[ ]jp_Nv0LxWH.tar.gz2015-04-17 19:10 325KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.