JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:32 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3nvsa_.name2015-04-17 16:27 0 Job name flag file
[ ]jp_kW7cHN_.align2015-04-17 17:30 385KPSIBLAST alignment in FASTA format
[TXT]jp_kW7cHN_.als2015-04-17 17:30 6.8KAlscript command file for PS/PDF output
[ ]jp_kW7cHN_.blast.gz2015-04-17 17:25 17MCompressed PSIBLAST output file
[TXT]jp_kW7cHN_.coils.csv2015-04-17 17:30 2.5KCOILS output in CSV format
[ ]jp_kW7cHN_.coilseq.lupas_142015-04-17 17:30 18KCOILS output, window length 14
[ ]jp_kW7cHN_.coilseq.lupas_212015-04-17 17:30 18KCOILS output, window length 21
[ ]jp_kW7cHN_.coilseq.lupas_282015-04-17 17:30 18KCOILS output, window length 28
[ ]jp_kW7cHN_.concise2015-04-17 17:30 770KPrediction: coiled-coil, solvent, alignment
[ ]jp_kW7cHN_.concise.blc2015-04-17 17:30 386KBLC format prediction and alignment data
[ ]jp_kW7cHN_.concise.fasta2015-04-17 17:30 389KPrediction: coiled-coil, solvent, alignment
[ ]jp_kW7cHN_.concise.pdf2015-04-17 17:31 2.9MPDF prediction and alignment data
[ ]jp_kW7cHN_.concise.ps2015-04-17 17:30 51MPrediction: coiled-coil, solvent, alignment
[ ]jp_kW7cHN_.fasta2015-04-17 17:00 444 Input query sequence in FASTA format
[ ]jp_kW7cHN_.full_MSA.fasta2015-04-17 17:28 32MFull MSA before JPred filters in FASTA
[TXT]jp_kW7cHN_.full_MSA.fasta.noGaps.html2015-04-17 17:32 4.1MFull MSA before JPred filters in FASTA
[TXT]jp_kW7cHN_.full_MSA.fasta.withGaps.html2015-04-17 17:32 105MFull MSA before JPred filters in FASTA
[ ]jp_kW7cHN_.hmm2015-04-17 17:30 80KHHMer2 profile of the alignment
[TXT]jp_kW7cHN_.html2015-04-17 17:30 592KHTML prediction and alignment data
[ ]jp_kW7cHN_.input2015-04-17 16:27 433 Raw input data for analysis
[ ]jp_kW7cHN_.jalview2015-04-17 17:30 9.4KJalview annotation file for alignment
[ ]jp_kW7cHN_.jnet2015-04-17 17:30 16KJnet secondary structure output
[TXT]jp_kW7cHN_.profile2015-04-17 17:20 68KPSIBLAST profile from alignment
[ ]jp_kW7cHN_.pssm2015-04-17 17:30 92KPSIBLAST PSSM for Jnet
[TXT]jp_kW7cHN_.results.html2016-02-15 12:21 182KJPred results page
[TXT]jp_kW7cHN_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_kW7cHN_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_kW7cHN_.seq2015-04-17 16:27 444 Sequence data file
[TXT]jp_kW7cHN_.simple.html2015-04-17 17:30 2.7KBrief HTML: sequence and prediction only
[TXT]jp_kW7cHN_.svg.html2015-04-17 17:32 174KJalview SVG summary of results
[ ]jp_kW7cHN_.tar.gz2015-04-17 17:32 32MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.