JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:19 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3os4a2.name2015-04-17 16:27 0 Job name flag file
[ ]jp_O_rXWcB.align2015-04-17 17:18 201KPSIBLAST alignment in FASTA format
[TXT]jp_O_rXWcB.als2015-04-17 17:18 3.7KAlscript command file for PS/PDF output
[ ]jp_O_rXWcB.blast.gz2015-04-17 17:16 4.0MCompressed PSIBLAST output file
[TXT]jp_O_rXWcB.coils.csv2015-04-17 17:18 1.5KCOILS output in CSV format
[ ]jp_O_rXWcB.coilseq.lupas_142015-04-17 17:18 11KCOILS output, window length 14
[ ]jp_O_rXWcB.coilseq.lupas_212015-04-17 17:18 11KCOILS output, window length 21
[ ]jp_O_rXWcB.coilseq.lupas_282015-04-17 17:18 11KCOILS output, window length 28
[ ]jp_O_rXWcB.concise2015-04-17 17:18 401KPrediction: coiled-coil, solvent, alignment
[ ]jp_O_rXWcB.concise.blc2015-04-17 17:18 202KBLC format prediction and alignment data
[ ]jp_O_rXWcB.concise.fasta2015-04-17 17:18 204KPrediction: coiled-coil, solvent, alignment
[ ]jp_O_rXWcB.concise.pdf2015-04-17 17:18 1.3MPDF prediction and alignment data
[ ]jp_O_rXWcB.concise.ps2015-04-17 17:18 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_O_rXWcB.fasta2015-04-17 17:00 271 Input query sequence in FASTA format
[ ]jp_O_rXWcB.full_MSA.fasta2015-04-17 17:17 12MFull MSA before JPred filters in FASTA
[TXT]jp_O_rXWcB.full_MSA.fasta.noGaps.html2015-04-17 17:19 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_O_rXWcB.full_MSA.fasta.withGaps.html2015-04-17 17:19 29MFull MSA before JPred filters in FASTA
[ ]jp_O_rXWcB.hmm2015-04-17 17:18 48KHHMer2 profile of the alignment
[TXT]jp_O_rXWcB.html2015-04-17 17:18 369KHTML prediction and alignment data
[ ]jp_O_rXWcB.input2015-04-17 16:27 262 Raw input data for analysis
[ ]jp_O_rXWcB.jalview2015-04-17 17:18 6.0KJalview annotation file for alignment
[ ]jp_O_rXWcB.jnet2015-04-17 17:18 9.3KJnet secondary structure output
[TXT]jp_O_rXWcB.profile2015-04-17 17:10 41KPSIBLAST profile from alignment
[ ]jp_O_rXWcB.pssm2015-04-17 17:18 55KPSIBLAST PSSM for Jnet
[TXT]jp_O_rXWcB.results.html2016-02-15 12:21 112KJPred results page
[TXT]jp_O_rXWcB.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_O_rXWcB.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_O_rXWcB.seq2015-04-17 16:27 271 Sequence data file
[TXT]jp_O_rXWcB.simple.html2015-04-17 17:18 1.8KBrief HTML: sequence and prediction only
[TXT]jp_O_rXWcB.svg.html2015-04-17 17:19 103KJalview SVG summary of results
[ ]jp_O_rXWcB.tar.gz2015-04-17 17:19 8.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.