JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rf3a1.name2015-04-17 17:42 0 Job name flag file
[ ]jp_H3i9YQn.align2015-04-17 19:09 22KPSIBLAST alignment in FASTA format
[TXT]jp_H3i9YQn.als2015-04-17 19:09 2.0KAlscript command file for PS/PDF output
[ ]jp_H3i9YQn.blast.gz2015-04-17 19:09 112KCompressed PSIBLAST output file
[TXT]jp_H3i9YQn.coils.csv2015-04-17 19:09 792 COILS output in CSV format
[ ]jp_H3i9YQn.coilseq.lupas_142015-04-17 19:09 5.3KCOILS output, window length 14
[ ]jp_H3i9YQn.coilseq.lupas_212015-04-17 19:09 5.3KCOILS output, window length 21
[ ]jp_H3i9YQn.coilseq.lupas_282015-04-17 19:09 5.3KCOILS output, window length 28
[ ]jp_H3i9YQn.concise2015-04-17 19:09 48KPrediction: coiled-coil, solvent, alignment
[ ]jp_H3i9YQn.concise.blc2015-04-17 19:09 24KBLC format prediction and alignment data
[ ]jp_H3i9YQn.concise.fasta2015-04-17 19:09 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_H3i9YQn.concise.pdf2015-04-17 19:09 159KPDF prediction and alignment data
[ ]jp_H3i9YQn.concise.ps2015-04-17 19:09 2.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_H3i9YQn.fasta2015-04-17 19:04 141 Input query sequence in FASTA format
[ ]jp_H3i9YQn.full_MSA.fasta2015-04-17 19:09 161KFull MSA before JPred filters in FASTA
[TXT]jp_H3i9YQn.full_MSA.fasta.noGaps.html2015-04-17 19:09 119KFull MSA before JPred filters in FASTA
[TXT]jp_H3i9YQn.full_MSA.fasta.withGaps.html2015-04-17 19:09 756KFull MSA before JPred filters in FASTA
[ ]jp_H3i9YQn.hmm2015-04-17 19:09 24KHHMer2 profile of the alignment
[TXT]jp_H3i9YQn.html2015-04-17 19:09 69KHTML prediction and alignment data
[ ]jp_H3i9YQn.input2015-04-17 17:42 134 Raw input data for analysis
[ ]jp_H3i9YQn.jalview2015-04-17 19:09 3.5KJalview annotation file for alignment
[ ]jp_H3i9YQn.jnet2015-04-17 19:09 4.7KJnet secondary structure output
[TXT]jp_H3i9YQn.profile2015-04-17 19:07 21KPSIBLAST profile from alignment
[ ]jp_H3i9YQn.pssm2015-04-17 19:09 27KPSIBLAST PSSM for Jnet
[TXT]jp_H3i9YQn.results.html2016-02-15 12:21 59KJPred results page
[TXT]jp_H3i9YQn.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_H3i9YQn.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_H3i9YQn.seq2015-04-17 17:42 141 Sequence data file
[TXT]jp_H3i9YQn.simple.html2015-04-17 19:09 1.3KBrief HTML: sequence and prediction only
[TXT]jp_H3i9YQn.svg.html2015-04-17 19:09 51KJalview SVG summary of results
[ ]jp_H3i9YQn.tar.gz2015-04-17 19:09 406KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.