JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:31 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3sjld_.name2015-04-17 18:18 0 Job name flag file
[ ]jp_82fuTC5.align2015-04-17 20:27 323KPSIBLAST alignment in FASTA format
[TXT]jp_82fuTC5.als2015-04-17 20:27 6.3KAlscript command file for PS/PDF output
[ ]jp_82fuTC5.blast.gz2015-04-17 20:17 32MCompressed PSIBLAST output file
[TXT]jp_82fuTC5.coils.csv2015-04-17 20:27 2.2KCOILS output in CSV format
[ ]jp_82fuTC5.coilseq.lupas_142015-04-17 20:27 16KCOILS output, window length 14
[ ]jp_82fuTC5.coilseq.lupas_212015-04-17 20:27 16KCOILS output, window length 21
[ ]jp_82fuTC5.coilseq.lupas_282015-04-17 20:27 16KCOILS output, window length 28
[ ]jp_82fuTC5.concise2015-04-17 20:27 645KPrediction: coiled-coil, solvent, alignment
[ ]jp_82fuTC5.concise.blc2015-04-17 20:27 324KBLC format prediction and alignment data
[ ]jp_82fuTC5.concise.fasta2015-04-17 20:27 327KPrediction: coiled-coil, solvent, alignment
[ ]jp_82fuTC5.concise.pdf2015-04-17 20:27 2.2MPDF prediction and alignment data
[ ]jp_82fuTC5.concise.ps2015-04-17 20:27 40MPrediction: coiled-coil, solvent, alignment
[ ]jp_82fuTC5.fasta2015-04-17 20:09 394 Input query sequence in FASTA format
[ ]jp_82fuTC5.full_MSA.fasta2015-04-17 20:23 181MFull MSA before JPred filters in FASTA
[TXT]jp_82fuTC5.full_MSA.fasta.noGaps.html2015-04-17 20:31 9.7MFull MSA before JPred filters in FASTA
[TXT]jp_82fuTC5.full_MSA.fasta.withGaps.html2015-04-17 20:31 356MFull MSA before JPred filters in FASTA
[ ]jp_82fuTC5.hmm2015-04-17 20:27 71KHHMer2 profile of the alignment
[TXT]jp_82fuTC5.html2015-04-17 20:27 511KHTML prediction and alignment data
[ ]jp_82fuTC5.input2015-04-17 18:18 383 Raw input data for analysis
[ ]jp_82fuTC5.jalview2015-04-17 20:27 8.3KJalview annotation file for alignment
[ ]jp_82fuTC5.jnet2015-04-17 20:27 14KJnet secondary structure output
[TXT]jp_82fuTC5.profile2015-04-17 20:13 60KPSIBLAST profile from alignment
[ ]jp_82fuTC5.pssm2015-04-17 20:27 81KPSIBLAST PSSM for Jnet
[TXT]jp_82fuTC5.results.html2016-02-15 12:21 158KJPred results page
[TXT]jp_82fuTC5.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_82fuTC5.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_82fuTC5.seq2015-04-17 18:18 394 Sequence data file
[TXT]jp_82fuTC5.simple.html2015-04-17 20:27 2.4KBrief HTML: sequence and prediction only
[TXT]jp_82fuTC5.svg.html2015-04-17 20:31 150KJalview SVG summary of results
[ ]jp_82fuTC5.tar.gz2015-04-17 20:31 64MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.