JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3u7qa_.name2015-04-17 18:55 0 Job name flag file
[ ]jp_BKW6CB5.align2015-04-17 21:11 382KPSIBLAST alignment in FASTA format
[TXT]jp_BKW6CB5.als2015-04-17 21:11 6.4KAlscript command file for PS/PDF output
[ ]jp_BKW6CB5.blast.gz2015-04-17 21:09 7.0MCompressed PSIBLAST output file
[TXT]jp_BKW6CB5.coils.csv2015-04-17 21:11 2.8KCOILS output in CSV format
[ ]jp_BKW6CB5.coilseq.lupas_142015-04-17 21:11 20KCOILS output, window length 14
[ ]jp_BKW6CB5.coilseq.lupas_212015-04-17 21:11 20KCOILS output, window length 21
[ ]jp_BKW6CB5.coilseq.lupas_282015-04-17 21:11 20KCOILS output, window length 28
[ ]jp_BKW6CB5.concise2015-04-17 21:11 767KPrediction: coiled-coil, solvent, alignment
[ ]jp_BKW6CB5.concise.blc2015-04-17 21:11 384KBLC format prediction and alignment data
[ ]jp_BKW6CB5.concise.fasta2015-04-17 21:11 387KPrediction: coiled-coil, solvent, alignment
[ ]jp_BKW6CB5.concise.pdf2015-04-17 21:11 2.7MPDF prediction and alignment data
[ ]jp_BKW6CB5.concise.ps2015-04-17 21:11 49MPrediction: coiled-coil, solvent, alignment
[ ]jp_BKW6CB5.fasta2015-04-17 21:01 496 Input query sequence in FASTA format
[ ]jp_BKW6CB5.full_MSA.fasta2015-04-17 21:10 18MFull MSA before JPred filters in FASTA
[TXT]jp_BKW6CB5.full_MSA.fasta.noGaps.html2015-04-17 21:12 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_BKW6CB5.full_MSA.fasta.withGaps.html2015-04-17 21:12 52MFull MSA before JPred filters in FASTA
[ ]jp_BKW6CB5.hmm2015-04-17 21:11 89KHHMer2 profile of the alignment
[TXT]jp_BKW6CB5.html2015-04-17 21:11 574KHTML prediction and alignment data
[ ]jp_BKW6CB5.input2015-04-17 18:55 484 Raw input data for analysis
[ ]jp_BKW6CB5.jalview2015-04-17 21:11 10KJalview annotation file for alignment
[ ]jp_BKW6CB5.jnet2015-04-17 21:11 17KJnet secondary structure output
[TXT]jp_BKW6CB5.profile2015-04-17 21:07 76KPSIBLAST profile from alignment
[ ]jp_BKW6CB5.pssm2015-04-17 21:11 102KPSIBLAST PSSM for Jnet
[TXT]jp_BKW6CB5.results.html2016-02-15 12:21 200KJPred results page
[TXT]jp_BKW6CB5.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_BKW6CB5.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_BKW6CB5.seq2015-04-17 18:55 496 Sequence data file
[TXT]jp_BKW6CB5.simple.html2015-04-17 21:11 2.7KBrief HTML: sequence and prediction only
[TXT]jp_BKW6CB5.svg.html2015-04-17 21:12 192KJalview SVG summary of results
[ ]jp_BKW6CB5.tar.gz2015-04-17 21:12 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.