JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:07 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3u81a_.name2015-04-17 16:28 0 Job name flag file
[ ]jp_GjJYxvN.align2015-04-17 17:06 247KPSIBLAST alignment in FASTA format
[TXT]jp_GjJYxvN.als2015-04-17 17:06 3.8KAlscript command file for PS/PDF output
[ ]jp_GjJYxvN.blast.gz2015-04-17 17:05 6.3MCompressed PSIBLAST output file
[TXT]jp_GjJYxvN.coils.csv2015-04-17 17:06 1.3KCOILS output in CSV format
[ ]jp_GjJYxvN.coilseq.lupas_142015-04-17 17:06 9.2KCOILS output, window length 14
[ ]jp_GjJYxvN.coilseq.lupas_212015-04-17 17:06 9.2KCOILS output, window length 21
[ ]jp_GjJYxvN.coilseq.lupas_282015-04-17 17:06 9.2KCOILS output, window length 28
[ ]jp_GjJYxvN.concise2015-04-17 17:06 486KPrediction: coiled-coil, solvent, alignment
[ ]jp_GjJYxvN.concise.blc2015-04-17 17:06 247KBLC format prediction and alignment data
[ ]jp_GjJYxvN.concise.fasta2015-04-17 17:06 250KPrediction: coiled-coil, solvent, alignment
[ ]jp_GjJYxvN.concise.pdf2015-04-17 17:07 1.7MPDF prediction and alignment data
[ ]jp_GjJYxvN.concise.ps2015-04-17 17:06 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_GjJYxvN.fasta2015-04-17 17:01 235 Input query sequence in FASTA format
[ ]jp_GjJYxvN.full_MSA.fasta2015-04-17 17:06 8.6MFull MSA before JPred filters in FASTA
[TXT]jp_GjJYxvN.full_MSA.fasta.noGaps.html2015-04-17 17:07 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_GjJYxvN.full_MSA.fasta.withGaps.html2015-04-17 17:07 27MFull MSA before JPred filters in FASTA
[ ]jp_GjJYxvN.hmm2015-04-17 17:06 41KHHMer2 profile of the alignment
[TXT]jp_GjJYxvN.html2015-04-17 17:06 469KHTML prediction and alignment data
[ ]jp_GjJYxvN.input2015-04-17 16:28 226 Raw input data for analysis
[ ]jp_GjJYxvN.jalview2015-04-17 17:06 5.2KJalview annotation file for alignment
[ ]jp_GjJYxvN.jnet2015-04-17 17:06 8.0KJnet secondary structure output
[TXT]jp_GjJYxvN.profile2015-04-17 17:04 35KPSIBLAST profile from alignment
[ ]jp_GjJYxvN.pssm2015-04-17 17:06 47KPSIBLAST PSSM for Jnet
[TXT]jp_GjJYxvN.results.html2016-02-15 12:21 98KJPred results page
[TXT]jp_GjJYxvN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_GjJYxvN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_GjJYxvN.seq2015-04-17 16:28 235 Sequence data file
[TXT]jp_GjJYxvN.simple.html2015-04-17 17:06 1.7KBrief HTML: sequence and prediction only
[TXT]jp_GjJYxvN.svg.html2015-04-17 17:07 90KJalview SVG summary of results
[ ]jp_GjJYxvN.tar.gz2015-04-17 17:07 11MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.