JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:17 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3zqua_.name2015-04-17 15:51 0 Job name flag file
[ ]jp_f525GO0.align2015-04-17 16:16 193KPSIBLAST alignment in FASTA format
[TXT]jp_f525GO0.als2015-04-17 16:16 3.3KAlscript command file for PS/PDF output
[ ]jp_f525GO0.blast.gz2015-04-17 16:15 3.8MCompressed PSIBLAST output file
[TXT]jp_f525GO0.coils.csv2015-04-17 16:16 1.2KCOILS output in CSV format
[ ]jp_f525GO0.coilseq.lupas_142015-04-17 16:16 8.7KCOILS output, window length 14
[ ]jp_f525GO0.coilseq.lupas_212015-04-17 16:16 8.7KCOILS output, window length 21
[ ]jp_f525GO0.coilseq.lupas_282015-04-17 16:16 8.7KCOILS output, window length 28
[ ]jp_f525GO0.concise2015-04-17 16:16 381KPrediction: coiled-coil, solvent, alignment
[ ]jp_f525GO0.concise.blc2015-04-17 16:16 194KBLC format prediction and alignment data
[ ]jp_f525GO0.concise.fasta2015-04-17 16:16 195KPrediction: coiled-coil, solvent, alignment
[ ]jp_f525GO0.concise.pdf2015-04-17 16:16 1.2MPDF prediction and alignment data
[ ]jp_f525GO0.concise.ps2015-04-17 16:16 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_f525GO0.fasta2015-04-17 16:07 222 Input query sequence in FASTA format
[ ]jp_f525GO0.full_MSA.fasta2015-04-17 16:15 12MFull MSA before JPred filters in FASTA
[TXT]jp_f525GO0.full_MSA.fasta.noGaps.html2015-04-17 16:17 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_f525GO0.full_MSA.fasta.withGaps.html2015-04-17 16:17 40MFull MSA before JPred filters in FASTA
[ ]jp_f525GO0.hmm2015-04-17 16:16 39KHHMer2 profile of the alignment
[TXT]jp_f525GO0.html2015-04-17 16:16 379KHTML prediction and alignment data
[ ]jp_f525GO0.input2015-04-17 15:51 214 Raw input data for analysis
[ ]jp_f525GO0.jalview2015-04-17 16:16 5.0KJalview annotation file for alignment
[ ]jp_f525GO0.jnet2015-04-17 16:16 7.6KJnet secondary structure output
[TXT]jp_f525GO0.profile2015-04-17 16:12 33KPSIBLAST profile from alignment
[ ]jp_f525GO0.pssm2015-04-17 16:16 44KPSIBLAST PSSM for Jnet
[TXT]jp_f525GO0.results.html2016-02-15 12:21 92KJPred results page
[TXT]jp_f525GO0.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_f525GO0.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_f525GO0.seq2015-04-17 15:51 222 Sequence data file
[TXT]jp_f525GO0.simple.html2015-04-17 16:16 1.6KBrief HTML: sequence and prediction only
[TXT]jp_f525GO0.svg.html2015-04-17 16:17 84KJalview SVG summary of results
[ ]jp_f525GO0.tar.gz2015-04-17 16:17 9.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.