JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:16 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4au1a_.name2015-04-17 17:06 0 Job name flag file
[ ]jp_8jXU9aw.align2015-04-17 18:15 191KPSIBLAST alignment in FASTA format
[TXT]jp_8jXU9aw.als2015-04-17 18:15 3.6KAlscript command file for PS/PDF output
[ ]jp_8jXU9aw.blast.gz2015-04-17 18:14 891KCompressed PSIBLAST output file
[TXT]jp_8jXU9aw.coils.csv2015-04-17 18:15 1.2KCOILS output in CSV format
[ ]jp_8jXU9aw.coilseq.lupas_142015-04-17 18:15 8.7KCOILS output, window length 14
[ ]jp_8jXU9aw.coilseq.lupas_212015-04-17 18:15 8.7KCOILS output, window length 21
[ ]jp_8jXU9aw.coilseq.lupas_282015-04-17 18:15 8.7KCOILS output, window length 28
[ ]jp_8jXU9aw.concise2015-04-17 18:15 378KPrediction: coiled-coil, solvent, alignment
[ ]jp_8jXU9aw.concise.blc2015-04-17 18:15 192KBLC format prediction and alignment data
[ ]jp_8jXU9aw.concise.fasta2015-04-17 18:15 193KPrediction: coiled-coil, solvent, alignment
[ ]jp_8jXU9aw.concise.pdf2015-04-17 18:16 1.3MPDF prediction and alignment data
[ ]jp_8jXU9aw.concise.ps2015-04-17 18:15 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_8jXU9aw.fasta2015-04-17 18:08 223 Input query sequence in FASTA format
[ ]jp_8jXU9aw.full_MSA.fasta2015-04-17 18:14 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_8jXU9aw.full_MSA.fasta.noGaps.html2015-04-17 18:16 520KFull MSA before JPred filters in FASTA
[TXT]jp_8jXU9aw.full_MSA.fasta.withGaps.html2015-04-17 18:16 5.0MFull MSA before JPred filters in FASTA
[ ]jp_8jXU9aw.hmm2015-04-17 18:15 39KHHMer2 profile of the alignment
[TXT]jp_8jXU9aw.html2015-04-17 18:15 378KHTML prediction and alignment data
[ ]jp_8jXU9aw.input2015-04-17 17:06 215 Raw input data for analysis
[ ]jp_8jXU9aw.jalview2015-04-17 18:15 5.1KJalview annotation file for alignment
[ ]jp_8jXU9aw.jnet2015-04-17 18:15 7.6KJnet secondary structure output
[TXT]jp_8jXU9aw.profile2015-04-17 18:13 33KPSIBLAST profile from alignment
[ ]jp_8jXU9aw.pssm2015-04-17 18:15 45KPSIBLAST PSSM for Jnet
[TXT]jp_8jXU9aw.results.html2016-02-15 12:21 94KJPred results page
[TXT]jp_8jXU9aw.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_8jXU9aw.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_8jXU9aw.seq2015-04-17 17:06 223 Sequence data file
[TXT]jp_8jXU9aw.simple.html2015-04-17 18:15 1.7KBrief HTML: sequence and prediction only
[TXT]jp_8jXU9aw.svg.html2015-04-17 18:16 86KJalview SVG summary of results
[ ]jp_8jXU9aw.tar.gz2015-04-17 18:16 3.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.