JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4ay7a_.name2015-04-17 18:56 0 Job name flag file
[ ]jp_s4PK1LD.align2015-04-17 21:14 317KPSIBLAST alignment in FASTA format
[TXT]jp_s4PK1LD.als2015-04-17 21:14 4.4KAlscript command file for PS/PDF output
[ ]jp_s4PK1LD.blast.gz2015-04-17 21:12 7.2MCompressed PSIBLAST output file
[TXT]jp_s4PK1LD.coils.csv2015-04-17 21:14 2.0KCOILS output in CSV format
[ ]jp_s4PK1LD.coilseq.lupas_142015-04-17 21:14 14KCOILS output, window length 14
[ ]jp_s4PK1LD.coilseq.lupas_212015-04-17 21:14 14KCOILS output, window length 21
[ ]jp_s4PK1LD.coilseq.lupas_282015-04-17 21:14 14KCOILS output, window length 28
[ ]jp_s4PK1LD.concise2015-04-17 21:14 632KPrediction: coiled-coil, solvent, alignment
[ ]jp_s4PK1LD.concise.blc2015-04-17 21:14 318KBLC format prediction and alignment data
[ ]jp_s4PK1LD.concise.fasta2015-04-17 21:14 321KPrediction: coiled-coil, solvent, alignment
[ ]jp_s4PK1LD.concise.pdf2015-04-17 21:14 2.4MPDF prediction and alignment data
[ ]jp_s4PK1LD.concise.ps2015-04-17 21:14 41MPrediction: coiled-coil, solvent, alignment
[ ]jp_s4PK1LD.fasta2015-04-17 21:04 354 Input query sequence in FASTA format
[ ]jp_s4PK1LD.full_MSA.fasta2015-04-17 21:13 14MFull MSA before JPred filters in FASTA
[TXT]jp_s4PK1LD.full_MSA.fasta.noGaps.html2015-04-17 21:15 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_s4PK1LD.full_MSA.fasta.withGaps.html2015-04-17 21:15 40MFull MSA before JPred filters in FASTA
[ ]jp_s4PK1LD.hmm2015-04-17 21:14 63KHHMer2 profile of the alignment
[TXT]jp_s4PK1LD.html2015-04-17 21:14 520KHTML prediction and alignment data
[ ]jp_s4PK1LD.input2015-04-17 18:56 344 Raw input data for analysis
[ ]jp_s4PK1LD.jalview2015-04-17 21:14 7.6KJalview annotation file for alignment
[ ]jp_s4PK1LD.jnet2015-04-17 21:14 12KJnet secondary structure output
[TXT]jp_s4PK1LD.profile2015-04-17 21:10 54KPSIBLAST profile from alignment
[ ]jp_s4PK1LD.pssm2015-04-17 21:14 72KPSIBLAST PSSM for Jnet
[TXT]jp_s4PK1LD.results.html2016-02-15 12:21 144KJPred results page
[TXT]jp_s4PK1LD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_s4PK1LD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_s4PK1LD.seq2015-04-17 18:56 354 Sequence data file
[TXT]jp_s4PK1LD.simple.html2015-04-17 21:14 2.0KBrief HTML: sequence and prediction only
[TXT]jp_s4PK1LD.svg.html2015-04-17 21:15 135KJalview SVG summary of results
[ ]jp_s4PK1LD.tar.gz2015-04-17 21:15 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.