JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4dwra_.name2015-04-17 16:29 0 Job name flag file
[ ]jp_Hy9j1qz.align2015-04-17 17:11 353KPSIBLAST alignment in FASTA format
[TXT]jp_Hy9j1qz.als2015-04-17 17:11 5.9KAlscript command file for PS/PDF output
[ ]jp_Hy9j1qz.blast.gz2015-04-17 17:10 5.2MCompressed PSIBLAST output file
[TXT]jp_Hy9j1qz.coils.csv2015-04-17 17:11 2.9KCOILS output in CSV format
[ ]jp_Hy9j1qz.coilseq.lupas_142015-04-17 17:11 20KCOILS output, window length 14
[ ]jp_Hy9j1qz.coilseq.lupas_212015-04-17 17:11 20KCOILS output, window length 21
[ ]jp_Hy9j1qz.coilseq.lupas_282015-04-17 17:11 20KCOILS output, window length 28
[ ]jp_Hy9j1qz.concise2015-04-17 17:11 710KPrediction: coiled-coil, solvent, alignment
[ ]jp_Hy9j1qz.concise.blc2015-04-17 17:11 355KBLC format prediction and alignment data
[ ]jp_Hy9j1qz.concise.fasta2015-04-17 17:11 358KPrediction: coiled-coil, solvent, alignment
[ ]jp_Hy9j1qz.concise.pdf2015-04-17 17:12 2.4MPDF prediction and alignment data
[ ]jp_Hy9j1qz.concise.ps2015-04-17 17:11 44MPrediction: coiled-coil, solvent, alignment
[ ]jp_Hy9j1qz.fasta2015-04-17 17:04 502 Input query sequence in FASTA format
[ ]jp_Hy9j1qz.full_MSA.fasta2015-04-17 17:11 9.0MFull MSA before JPred filters in FASTA
[TXT]jp_Hy9j1qz.full_MSA.fasta.noGaps.html2015-04-17 17:12 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_Hy9j1qz.full_MSA.fasta.withGaps.html2015-04-17 17:12 27MFull MSA before JPred filters in FASTA
[ ]jp_Hy9j1qz.hmm2015-04-17 17:11 91KHHMer2 profile of the alignment
[TXT]jp_Hy9j1qz.html2015-04-17 17:11 529KHTML prediction and alignment data
[ ]jp_Hy9j1qz.input2015-04-17 16:29 490 Raw input data for analysis
[ ]jp_Hy9j1qz.jalview2015-04-17 17:11 10KJalview annotation file for alignment
[ ]jp_Hy9j1qz.jnet2015-04-17 17:11 18KJnet secondary structure output
[TXT]jp_Hy9j1qz.profile2015-04-17 17:08 77KPSIBLAST profile from alignment
[ ]jp_Hy9j1qz.pssm2015-04-17 17:11 104KPSIBLAST PSSM for Jnet
[TXT]jp_Hy9j1qz.results.html2016-02-15 12:21 200KJPred results page
[TXT]jp_Hy9j1qz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Hy9j1qz.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_Hy9j1qz.seq2015-04-17 16:29 502 Sequence data file
[TXT]jp_Hy9j1qz.simple.html2015-04-17 17:11 2.6KBrief HTML: sequence and prediction only
[TXT]jp_Hy9j1qz.svg.html2015-04-17 17:12 191KJalview SVG summary of results
[ ]jp_Hy9j1qz.tar.gz2015-04-17 17:12 11MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.