JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:11 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4e4ra_.name2015-04-17 18:57 0 Job name flag file
[ ]jp_DbjAb0L.align2015-04-17 21:10 251KPSIBLAST alignment in FASTA format
[TXT]jp_DbjAb0L.als2015-04-17 21:10 4.9KAlscript command file for PS/PDF output
[ ]jp_DbjAb0L.blast.gz2015-04-17 21:09 4.1MCompressed PSIBLAST output file
[TXT]jp_DbjAb0L.coils.csv2015-04-17 21:10 2.0KCOILS output in CSV format
[ ]jp_DbjAb0L.coilseq.lupas_142015-04-17 21:10 14KCOILS output, window length 14
[ ]jp_DbjAb0L.coilseq.lupas_212015-04-17 21:10 14KCOILS output, window length 21
[ ]jp_DbjAb0L.coilseq.lupas_282015-04-17 21:10 14KCOILS output, window length 28
[ ]jp_DbjAb0L.concise2015-04-17 21:10 501KPrediction: coiled-coil, solvent, alignment
[ ]jp_DbjAb0L.concise.blc2015-04-17 21:10 252KBLC format prediction and alignment data
[ ]jp_DbjAb0L.concise.fasta2015-04-17 21:10 254KPrediction: coiled-coil, solvent, alignment
[ ]jp_DbjAb0L.concise.pdf2015-04-17 21:11 1.8MPDF prediction and alignment data
[ ]jp_DbjAb0L.concise.ps2015-04-17 21:10 32MPrediction: coiled-coil, solvent, alignment
[ ]jp_DbjAb0L.fasta2015-04-17 21:04 347 Input query sequence in FASTA format
[ ]jp_DbjAb0L.full_MSA.fasta2015-04-17 21:10 5.4MFull MSA before JPred filters in FASTA
[TXT]jp_DbjAb0L.full_MSA.fasta.noGaps.html2015-04-17 21:11 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_DbjAb0L.full_MSA.fasta.withGaps.html2015-04-17 21:11 27MFull MSA before JPred filters in FASTA
[ ]jp_DbjAb0L.hmm2015-04-17 21:10 62KHHMer2 profile of the alignment
[TXT]jp_DbjAb0L.html2015-04-17 21:10 423KHTML prediction and alignment data
[ ]jp_DbjAb0L.input2015-04-17 18:57 337 Raw input data for analysis
[ ]jp_DbjAb0L.jalview2015-04-17 21:10 7.5KJalview annotation file for alignment
[ ]jp_DbjAb0L.jnet2015-04-17 21:10 12KJnet secondary structure output
[TXT]jp_DbjAb0L.profile2015-04-17 21:08 53KPSIBLAST profile from alignment
[ ]jp_DbjAb0L.pssm2015-04-17 21:10 71KPSIBLAST PSSM for Jnet
[TXT]jp_DbjAb0L.results.html2016-02-15 12:21 143KJPred results page
[TXT]jp_DbjAb0L.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_DbjAb0L.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_DbjAb0L.seq2015-04-17 18:57 347 Sequence data file
[TXT]jp_DbjAb0L.simple.html2015-04-17 21:10 2.1KBrief HTML: sequence and prediction only
[TXT]jp_DbjAb0L.svg.html2015-04-17 21:11 134KJalview SVG summary of results
[ ]jp_DbjAb0L.tar.gz2015-04-17 21:11 9.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.