JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4emta_.name2015-04-17 17:44 0 Job name flag file
[ ]jp_XlkobkA.align2015-04-17 19:14 17KPSIBLAST alignment in FASTA format
[TXT]jp_XlkobkA.als2015-04-17 19:14 2.7KAlscript command file for PS/PDF output
[ ]jp_XlkobkA.blast.gz2015-04-17 19:14 73KCompressed PSIBLAST output file
[TXT]jp_XlkobkA.coils.csv2015-04-17 19:14 1.1KCOILS output in CSV format
[ ]jp_XlkobkA.coilseq.lupas_142015-04-17 19:14 7.3KCOILS output, window length 14
[ ]jp_XlkobkA.coilseq.lupas_212015-04-17 19:14 7.3KCOILS output, window length 21
[ ]jp_XlkobkA.coilseq.lupas_282015-04-17 19:14 7.3KCOILS output, window length 28
[ ]jp_XlkobkA.concise2015-04-17 19:14 39KPrediction: coiled-coil, solvent, alignment
[ ]jp_XlkobkA.concise.blc2015-04-17 19:14 19KBLC format prediction and alignment data
[ ]jp_XlkobkA.concise.fasta2015-04-17 19:14 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_XlkobkA.concise.pdf2015-04-17 19:14 127KPDF prediction and alignment data
[ ]jp_XlkobkA.concise.ps2015-04-17 19:14 2.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_XlkobkA.fasta2015-04-17 19:09 190 Input query sequence in FASTA format
[ ]jp_XlkobkA.full_MSA.fasta2015-04-17 19:14 97KFull MSA before JPred filters in FASTA
[TXT]jp_XlkobkA.full_MSA.fasta.noGaps.html2015-04-17 19:14 48KFull MSA before JPred filters in FASTA
[TXT]jp_XlkobkA.full_MSA.fasta.withGaps.html2015-04-17 19:14 431KFull MSA before JPred filters in FASTA
[ ]jp_XlkobkA.hmm2015-04-17 19:14 33KHHMer2 profile of the alignment
[TXT]jp_XlkobkA.html2015-04-17 19:14 50KHTML prediction and alignment data
[ ]jp_XlkobkA.input2015-04-17 17:44 182 Raw input data for analysis
[ ]jp_XlkobkA.jalview2015-04-17 19:14 4.3KJalview annotation file for alignment
[ ]jp_XlkobkA.jnet2015-04-17 19:14 6.4KJnet secondary structure output
[TXT]jp_XlkobkA.profile2015-04-17 19:12 28KPSIBLAST profile from alignment
[ ]jp_XlkobkA.pssm2015-04-17 19:14 38KPSIBLAST PSSM for Jnet
[TXT]jp_XlkobkA.results.html2016-02-15 12:21 79KJPred results page
[TXT]jp_XlkobkA.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_XlkobkA.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_XlkobkA.seq2015-04-17 17:44 190 Sequence data file
[TXT]jp_XlkobkA.simple.html2015-04-17 19:14 1.5KBrief HTML: sequence and prediction only
[TXT]jp_XlkobkA.svg.html2015-04-17 19:14 70KJalview SVG summary of results
[ ]jp_XlkobkA.tar.gz2015-04-17 19:15 310KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.