JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_UnBCx00.tar.gz2015-04-17 17:09 5.7MArchive containing complete results
[TXT]jp_UnBCx00.svg.html2015-04-17 17:09 59KJalview SVG summary of results
[TXT]jp_UnBCx00.simple.html2015-04-17 17:08 1.4KBrief HTML: sequence and prediction only
[ ]jp_UnBCx00.seq2015-04-17 16:29 157 Sequence data file
[TXT]jp_UnBCx00.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[TXT]jp_UnBCx00.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_UnBCx00.results.html2016-02-15 12:21 67KJPred results page
[ ]jp_UnBCx00.pssm2015-04-17 17:08 31KPSIBLAST PSSM for Jnet
[TXT]jp_UnBCx00.profile2015-04-17 17:07 23KPSIBLAST profile from alignment
[ ]jp_UnBCx00.jnet2015-04-17 17:08 5.3KJnet secondary structure output
[ ]jp_UnBCx00.jalview2015-04-17 17:08 3.7KJalview annotation file for alignment
[ ]jp_UnBCx00.input2015-04-17 16:29 150 Raw input data for analysis
[TXT]jp_UnBCx00.html2015-04-17 17:08 287KHTML prediction and alignment data
[ ]jp_UnBCx00.hmm2015-04-17 17:08 27KHHMer2 profile of the alignment
[TXT]jp_UnBCx00.full_MSA.fasta.withGaps.html2015-04-17 17:09 18MFull MSA before JPred filters in FASTA
[TXT]jp_UnBCx00.full_MSA.fasta.noGaps.html2015-04-17 17:09 1.0MFull MSA before JPred filters in FASTA
[ ]jp_UnBCx00.full_MSA.fasta2015-04-17 17:08 5.7MFull MSA before JPred filters in FASTA
[ ]jp_UnBCx00.fasta2015-04-17 17:05 157 Input query sequence in FASTA format
[ ]jp_UnBCx00.concise.ps2015-04-17 17:08 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_UnBCx00.concise.pdf2015-04-17 17:09 836KPDF prediction and alignment data
[ ]jp_UnBCx00.concise.fasta2015-04-17 17:08 125KPrediction: coiled-coil, solvent, alignment
[ ]jp_UnBCx00.concise.blc2015-04-17 17:08 124KBLC format prediction and alignment data
[ ]jp_UnBCx00.concise2015-04-17 17:08 242KPrediction: coiled-coil, solvent, alignment
[ ]jp_UnBCx00.coilseq.lupas_282015-04-17 17:08 6.0KCOILS output, window length 28
[ ]jp_UnBCx00.coilseq.lupas_212015-04-17 17:08 6.0KCOILS output, window length 21
[ ]jp_UnBCx00.coilseq.lupas_142015-04-17 17:08 6.0KCOILS output, window length 14
[TXT]jp_UnBCx00.coils.csv2015-04-17 17:08 888 COILS output in CSV format
[ ]jp_UnBCx00.blast.gz2015-04-17 17:07 2.9MCompressed PSIBLAST output file
[TXT]jp_UnBCx00.als2015-04-17 17:08 2.7KAlscript command file for PS/PDF output
[ ]jp_UnBCx00.align2015-04-17 17:08 123KPSIBLAST alignment in FASTA format
[TXT]d4eo7a_.name2015-04-17 16:29 0 Job name flag file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]LOG2015-04-17 17:09 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.