JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:22 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4eqpa_.name2015-04-17 19:33 0 Job name flag file
[ ]jp_zesFRnN.align2015-04-17 22:21 136KPSIBLAST alignment in FASTA format
[TXT]jp_zesFRnN.als2015-04-17 22:21 2.6KAlscript command file for PS/PDF output
[ ]jp_zesFRnN.blast.gz2015-04-17 22:20 3.3MCompressed PSIBLAST output file
[TXT]jp_zesFRnN.coils.csv2015-04-17 22:21 804 COILS output in CSV format
[ ]jp_zesFRnN.coilseq.lupas_142015-04-17 22:21 5.4KCOILS output, window length 14
[ ]jp_zesFRnN.coilseq.lupas_212015-04-17 22:21 5.4KCOILS output, window length 21
[ ]jp_zesFRnN.coilseq.lupas_282015-04-17 22:21 5.4KCOILS output, window length 28
[ ]jp_zesFRnN.concise2015-04-17 22:21 265KPrediction: coiled-coil, solvent, alignment
[ ]jp_zesFRnN.concise.blc2015-04-17 22:21 136KBLC format prediction and alignment data
[ ]jp_zesFRnN.concise.fasta2015-04-17 22:21 137KPrediction: coiled-coil, solvent, alignment
[ ]jp_zesFRnN.concise.pdf2015-04-17 22:21 909KPDF prediction and alignment data
[ ]jp_zesFRnN.concise.ps2015-04-17 22:21 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_zesFRnN.fasta2015-04-17 22:16 143 Input query sequence in FASTA format
[ ]jp_zesFRnN.full_MSA.fasta2015-04-17 22:21 5.3MFull MSA before JPred filters in FASTA
[TXT]jp_zesFRnN.full_MSA.fasta.noGaps.html2015-04-17 22:22 872KFull MSA before JPred filters in FASTA
[TXT]jp_zesFRnN.full_MSA.fasta.withGaps.html2015-04-17 22:22 15MFull MSA before JPred filters in FASTA
[ ]jp_zesFRnN.hmm2015-04-17 22:21 24KHHMer2 profile of the alignment
[TXT]jp_zesFRnN.html2015-04-17 22:21 328KHTML prediction and alignment data
[ ]jp_zesFRnN.input2015-04-17 19:33 136 Raw input data for analysis
[ ]jp_zesFRnN.jalview2015-04-17 22:21 3.4KJalview annotation file for alignment
[ ]jp_zesFRnN.jnet2015-04-17 22:21 4.8KJnet secondary structure output
[TXT]jp_zesFRnN.profile2015-04-17 22:19 21KPSIBLAST profile from alignment
[ ]jp_zesFRnN.pssm2015-04-17 22:21 28KPSIBLAST PSSM for Jnet
[TXT]jp_zesFRnN.results.html2016-02-15 12:21 61KJPred results page
[TXT]jp_zesFRnN.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_zesFRnN.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_zesFRnN.seq2015-04-17 19:33 143 Sequence data file
[TXT]jp_zesFRnN.simple.html2015-04-17 22:21 1.3KBrief HTML: sequence and prediction only
[TXT]jp_zesFRnN.svg.html2015-04-17 22:22 53KJalview SVG summary of results
[ ]jp_zesFRnN.tar.gz2015-04-17 22:22 6.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.