JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:13 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4f19a_.name2015-04-17 18:57 0 Job name flag file
[ ]jp_EZr_GTm.align2015-04-17 21:12 320KPSIBLAST alignment in FASTA format
[TXT]jp_EZr_GTm.als2015-04-17 21:12 4.9KAlscript command file for PS/PDF output
[ ]jp_EZr_GTm.blast.gz2015-04-17 21:10 7.5MCompressed PSIBLAST output file
[TXT]jp_EZr_GTm.coils.csv2015-04-17 21:12 2.2KCOILS output in CSV format
[ ]jp_EZr_GTm.coilseq.lupas_142015-04-17 21:12 16KCOILS output, window length 14
[ ]jp_EZr_GTm.coilseq.lupas_212015-04-17 21:12 16KCOILS output, window length 21
[ ]jp_EZr_GTm.coilseq.lupas_282015-04-17 21:12 16KCOILS output, window length 28
[ ]jp_EZr_GTm.concise2015-04-17 21:12 638KPrediction: coiled-coil, solvent, alignment
[ ]jp_EZr_GTm.concise.blc2015-04-17 21:12 321KBLC format prediction and alignment data
[ ]jp_EZr_GTm.concise.fasta2015-04-17 21:12 324KPrediction: coiled-coil, solvent, alignment
[ ]jp_EZr_GTm.concise.pdf2015-04-17 21:12 2.0MPDF prediction and alignment data
[ ]jp_EZr_GTm.concise.ps2015-04-17 21:12 39MPrediction: coiled-coil, solvent, alignment
[ ]jp_EZr_GTm.fasta2015-04-17 21:05 393 Input query sequence in FASTA format
[ ]jp_EZr_GTm.full_MSA.fasta2015-04-17 21:11 19MFull MSA before JPred filters in FASTA
[TXT]jp_EZr_GTm.full_MSA.fasta.noGaps.html2015-04-17 21:13 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_EZr_GTm.full_MSA.fasta.withGaps.html2015-04-17 21:13 62MFull MSA before JPred filters in FASTA
[ ]jp_EZr_GTm.hmm2015-04-17 21:12 70KHHMer2 profile of the alignment
[TXT]jp_EZr_GTm.html2015-04-17 21:12 503KHTML prediction and alignment data
[ ]jp_EZr_GTm.input2015-04-17 18:57 382 Raw input data for analysis
[ ]jp_EZr_GTm.jalview2015-04-17 21:12 8.2KJalview annotation file for alignment
[ ]jp_EZr_GTm.jnet2015-04-17 21:12 14KJnet secondary structure output
[TXT]jp_EZr_GTm.profile2015-04-17 21:08 60KPSIBLAST profile from alignment
[ ]jp_EZr_GTm.pssm2015-04-17 21:12 81KPSIBLAST PSSM for Jnet
[TXT]jp_EZr_GTm.results.html2016-02-15 12:21 158KJPred results page
[TXT]jp_EZr_GTm.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_EZr_GTm.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_EZr_GTm.seq2015-04-17 18:57 393 Sequence data file
[TXT]jp_EZr_GTm.simple.html2015-04-17 21:12 2.2KBrief HTML: sequence and prediction only
[TXT]jp_EZr_GTm.svg.html2015-04-17 21:13 150KJalview SVG summary of results
[ ]jp_EZr_GTm.tar.gz2015-04-17 21:13 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.