JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:24 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4fhrb_.name2015-04-17 19:33 0 Job name flag file
[ ]jp_3HqxiC6.align2015-04-17 22:23 175KPSIBLAST alignment in FASTA format
[TXT]jp_3HqxiC6.als2015-04-17 22:23 3.4KAlscript command file for PS/PDF output
[ ]jp_3HqxiC6.blast.gz2015-04-17 22:23 929KCompressed PSIBLAST output file
[TXT]jp_3HqxiC6.coils.csv2015-04-17 22:23 1.2KCOILS output in CSV format
[ ]jp_3HqxiC6.coilseq.lupas_142015-04-17 22:23 8.7KCOILS output, window length 14
[ ]jp_3HqxiC6.coilseq.lupas_212015-04-17 22:23 8.7KCOILS output, window length 21
[ ]jp_3HqxiC6.coilseq.lupas_282015-04-17 22:23 8.7KCOILS output, window length 28
[ ]jp_3HqxiC6.concise2015-04-17 22:23 347KPrediction: coiled-coil, solvent, alignment
[ ]jp_3HqxiC6.concise.blc2015-04-17 22:23 176KBLC format prediction and alignment data
[ ]jp_3HqxiC6.concise.fasta2015-04-17 22:23 177KPrediction: coiled-coil, solvent, alignment
[ ]jp_3HqxiC6.concise.pdf2015-04-17 22:24 1.2MPDF prediction and alignment data
[ ]jp_3HqxiC6.concise.ps2015-04-17 22:23 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_3HqxiC6.fasta2015-04-17 22:16 223 Input query sequence in FASTA format
[ ]jp_3HqxiC6.full_MSA.fasta2015-04-17 22:23 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_3HqxiC6.full_MSA.fasta.noGaps.html2015-04-17 22:24 492KFull MSA before JPred filters in FASTA
[TXT]jp_3HqxiC6.full_MSA.fasta.withGaps.html2015-04-17 22:24 4.9MFull MSA before JPred filters in FASTA
[ ]jp_3HqxiC6.hmm2015-04-17 22:23 39KHHMer2 profile of the alignment
[TXT]jp_3HqxiC6.html2015-04-17 22:23 347KHTML prediction and alignment data
[ ]jp_3HqxiC6.input2015-04-17 19:33 215 Raw input data for analysis
[ ]jp_3HqxiC6.jalview2015-04-17 22:23 5.1KJalview annotation file for alignment
[ ]jp_3HqxiC6.jnet2015-04-17 22:23 7.6KJnet secondary structure output
[TXT]jp_3HqxiC6.profile2015-04-17 22:20 33KPSIBLAST profile from alignment
[ ]jp_3HqxiC6.pssm2015-04-17 22:23 45KPSIBLAST PSSM for Jnet
[TXT]jp_3HqxiC6.results.html2016-02-15 12:21 95KJPred results page
[TXT]jp_3HqxiC6.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_3HqxiC6.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_3HqxiC6.seq2015-04-17 19:33 223 Sequence data file
[TXT]jp_3HqxiC6.simple.html2015-04-17 22:23 1.6KBrief HTML: sequence and prediction only
[TXT]jp_3HqxiC6.svg.html2015-04-17 22:24 87KJalview SVG summary of results
[ ]jp_3HqxiC6.tar.gz2015-04-17 22:24 2.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.