A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:25 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d4heia_.name | 2015-04-17 19:43 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_Oay1wxp.align | 2015-04-17 22:25 | 86K | PSIBLAST alignment in FASTA format |
| jp_Oay1wxp.als | 2015-04-17 22:25 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_Oay1wxp.blast.gz | 2015-04-17 22:24 | 1.0M | Compressed PSIBLAST output file |
| jp_Oay1wxp.coils.csv | 2015-04-17 22:25 | 582 | COILS output in CSV format |
| jp_Oay1wxp.coilseq.lupas_14 | 2015-04-17 22:25 | 3.9K | COILS output, window length 14 |
| jp_Oay1wxp.coilseq.lupas_21 | 2015-04-17 22:25 | 3.9K | COILS output, window length 21 |
| jp_Oay1wxp.coilseq.lupas_28 | 2015-04-17 22:25 | 3.9K | COILS output, window length 28 |
| jp_Oay1wxp.concise | 2015-04-17 22:25 | 165K | Prediction: coiled-coil, solvent, alignment |
| jp_Oay1wxp.concise.blc | 2015-04-17 22:25 | 86K | BLC format prediction and alignment data |
| jp_Oay1wxp.concise.fasta | 2015-04-17 22:25 | 87K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_Oay1wxp.concise.pdf | 2015-04-17 22:25 | 574K | PDF prediction and alignment data |
| jp_Oay1wxp.concise.ps | 2015-04-17 22:25 | 9.7M | Prediction: coiled-coil, solvent, alignment |
| jp_Oay1wxp.fasta | 2015-04-17 22:22 | 106 | Input query sequence in FASTA format |
| jp_Oay1wxp.full_MSA.fasta | 2015-04-17 22:24 | 1.6M | Full MSA before JPred filters in FASTA |
| jp_Oay1wxp.full_MSA.fasta.noGaps.html | 2015-04-17 22:25 | 740K | Full MSA before JPred filters in FASTA |
| jp_Oay1wxp.full_MSA.fasta.withGaps.html | 2015-04-17 22:25 | 7.4M | Full MSA before JPred filters in FASTA |
| jp_Oay1wxp.hmm | 2015-04-17 22:25 | 17K | HHMer2 profile of the alignment |
| jp_Oay1wxp.html | 2015-04-17 22:25 | 246K | HTML prediction and alignment data |
| jp_Oay1wxp.input | 2015-04-17 19:43 | 99 | Raw input data for analysis |
| jp_Oay1wxp.jalview | 2015-04-17 22:25 | 2.7K | Jalview annotation file for alignment |
| jp_Oay1wxp.jnet | 2015-04-17 22:25 | 3.4K | Jnet secondary structure output |
| jp_Oay1wxp.profile | 2015-04-17 22:23 | 15K | PSIBLAST profile from alignment |
| jp_Oay1wxp.pssm | 2015-04-17 22:25 | 20K | PSIBLAST PSSM for Jnet |
| jp_Oay1wxp.results.html | 2016-02-15 12:21 | 46K | JPred results page |
| jp_Oay1wxp.results_jalview.html | 2016-02-24 17:19 | 13K | Jalview results options |
| jp_Oay1wxp.results_jalview_app.html | 2016-02-24 17:19 | 16K | HTML prediction and alignment data |
| jp_Oay1wxp.seq | 2015-04-17 19:43 | 106 | Sequence data file |
| jp_Oay1wxp.simple.html | 2015-04-17 22:25 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_Oay1wxp.svg.html) | jp_Oay1wxp.svg.html | 2015-04-17 22:25 | 38K | Jalview SVG summary of results |
| jp_Oay1wxp.tar.gz | 2015-04-17 22:25 | 2.5M | Archive containing complete results |
