JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:35 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4htga2.name2015-04-17 18:21 0 Job name flag file
[ ]jp_lZRCQ_9.align2015-04-17 22:34 85KPSIBLAST alignment in FASTA format
[TXT]jp_lZRCQ_9.als2015-04-17 22:34 1.9KAlscript command file for PS/PDF output
[ ]jp_lZRCQ_9.blast.gz2015-04-17 22:34 1.3MCompressed PSIBLAST output file
[TXT]jp_lZRCQ_9.coils.csv2015-04-17 22:34 510 COILS output in CSV format
[ ]jp_lZRCQ_9.coilseq.lupas_142015-04-17 22:34 3.4KCOILS output, window length 14
[ ]jp_lZRCQ_9.coilseq.lupas_212015-04-17 22:34 3.4KCOILS output, window length 21
[ ]jp_lZRCQ_9.coilseq.lupas_282015-04-17 22:34 3.4KCOILS output, window length 28
[ ]jp_lZRCQ_9.concise2015-04-17 22:34 162KPrediction: coiled-coil, solvent, alignment
[ ]jp_lZRCQ_9.concise.blc2015-04-17 22:34 85KBLC format prediction and alignment data
[ ]jp_lZRCQ_9.concise.fasta2015-04-17 22:34 86KPrediction: coiled-coil, solvent, alignment
[ ]jp_lZRCQ_9.concise.pdf2015-04-17 22:35 540KPDF prediction and alignment data
[ ]jp_lZRCQ_9.concise.ps2015-04-17 22:34 9.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_lZRCQ_9.fasta2015-04-17 20:12 94 Input query sequence in FASTA format
[ ]jp_lZRCQ_9.full_MSA.fasta2015-04-17 22:34 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_lZRCQ_9.full_MSA.fasta.noGaps.html2015-04-17 22:35 656KFull MSA before JPred filters in FASTA
[TXT]jp_lZRCQ_9.full_MSA.fasta.withGaps.html2015-04-17 22:35 6.7MFull MSA before JPred filters in FASTA
[ ]jp_lZRCQ_9.hmm2015-04-17 22:34 15KHHMer2 profile of the alignment
[TXT]jp_lZRCQ_9.html2015-04-17 22:34 262KHTML prediction and alignment data
[ ]jp_lZRCQ_9.input2015-04-17 18:21 87 Raw input data for analysis
[ ]jp_lZRCQ_9.jalview2015-04-17 22:34 2.5KJalview annotation file for alignment
[ ]jp_lZRCQ_9.jnet2015-04-17 22:34 3.0KJnet secondary structure output
[TXT]jp_lZRCQ_9.profile2015-04-17 22:24 13KPSIBLAST profile from alignment
[ ]jp_lZRCQ_9.pssm2015-04-17 22:34 17KPSIBLAST PSSM for Jnet
[TXT]jp_lZRCQ_9.results.html2016-02-15 12:21 42KJPred results page
[TXT]jp_lZRCQ_9.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_lZRCQ_9.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_lZRCQ_9.seq2015-04-17 18:21 94 Sequence data file
[TXT]jp_lZRCQ_9.simple.html2015-04-17 22:34 1.1KBrief HTML: sequence and prediction only
[TXT]jp_lZRCQ_9.svg.html2015-04-17 22:35 34KJalview SVG summary of results
[ ]jp_lZRCQ_9.tar.gz2015-04-17 22:35 2.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.