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Publications: to 1991

Barton, G. J., (1991), 
"Scanning Protein Sequence Databanks Using a Distributed Processing Workstation Network", Comp. Appl. Bio. Sci., 7, 85-88. 

C code discussed in this paper is available by email from Geoff. Barton
 


Barton, G. J., Freemont, P. F., Newman, R. & Crumpton, M. (1991), 
"Sequence Analysis of the Annexin Super Gene Family of Proteins" Eur. J. Biochem, 198, 749-760. (ICRF/OX) 


Barton, G. J. & Sternberg, M. J. E., (1990), 
"Flexible Protein Sequence Patterns, A Sensitive Method to Detect Weak Structural Similarities", J. Mol. Biol., 212, 389-402. (BBK/ICRF) 

The AMPS package for multiple alignment and flexible pattern matching is available from our software distribution  server. 


Newman, R. H., Freemont, P. S., Barton, G. J. and Crumpton, M. J.,(1990), 
"Interaction of Synthetic Peptides from Annexin I and Uteroglobin with Lipid Monolayers and their Effect on Phospholipase A2 Activity", Biochem. Soc. Trans., 18, 1233-1234. (ICRF) 

 


Banga, J. P., Mahadevan, D., Barton, G. J., Sutton, B. J.,
Saldanha, J. W., Odell, E. and McGregor, A. M.(1990),
 "Prediction of Domain Organisation and Secondary Structure of Thyroid Peroxidase, a Human Autoantigen Involved in Destructive Thyroiditis", FEBS. Lett., 266, 133-141. (ICRF) 


Clark, D. A., Barton, G. J. & Rawlings, C. J., (1990a), 
"A Knowledge-Based Architecture for Protein Sequence Analysis and Structure Prediction", J. Mol. Graphics, 8,94-107. (ICRF) 


Clark, D. A., Archer, I., Barton, G. J. & Rawlings, C. J., (1990b), 
"Knowledge-Based Orchestration of Protein Sequence Analysis and Knowledge Acquisition for Protein Structure Prediction", Proc. of AAAI, March 1990. (ICRF) 

Barton, G. J. & Sternberg, M. J. E., (1988), 
"LOPAL and SCAMP: Techniques for the Comparison and Display of Protein Structures", J. Mol. Graphics., 6, 190-196. (BBK) 

LOPAL described in this paper was the forerunner of STAMP. Get STAMP if you want to compare protein structures. If you are interested in the code for the graphics program SCAMP written for the Evans and Sutherland PS330, contact Geoff. Barton 


Barton, G. J. & Sternberg, M. J. E., (1987a), 
"Evaluation and Improvements in the Automatic Alignment of Protein Sequences", Prot. Eng., 1, 89-94. (BBK) 

The ideas in this paper are included in the AMPS package - see our software distribution server .


Barton, G. J. & Sternberg, M. J. E., (1987b), 
"A Strategy for the Rapid Multiple Alignment of Protein Sequences: Confidence Levels from Tertiary Structure Comparisons", J. Mol. Biol.,198, 327-337. (BBK) 

AMPS is available from our software distribution server.


Zvelebil, M. J. J., Barton, G. J., Taylor, W. R. & Sternberg, M. J. E., (1987), 
"Prediction of Protein Secondary Structure and Active Sites Using the Alignment of Homologous Sequences", J. Mol. Biol.,195, 957-961.(BBK)  


Coates, A. R. M., Cookson, J., Barton, G. J., Zvelebil, M. J. J., & Sternberg, M. J. E., (1987), 
"AIDS Vaccine Predictions", Nature, 326, 549-550. (BBK)  


Sternberg, M. J. E., Barton, G. J., Zvelebil, M. J. J., Cookson, J., & Coates, A. R. M., (1987), 
"Prediction of Antigenic Determinants and Secondary Structures of the Major AIDS Virus Proteins", FEBS Lett., 281, 231-237. (BBK)