| Directory | Changes | Lines of Code |
|---|---|---|
| Totals | 12675 (100.0%) | 196094 (100.0%) |
| src/jalview/gui/ | 2720 (21.5%) | 43968 (22.4%) |
| src/jalview/appletgui/ | 1096 (8.6%) | 21812 (11.1%) |
| src/com/stevesoft/pat/ | 249 (2.0%) | 17521 (8.9%) |
| src/jalview/binding/ | 587 (4.6%) | 10667 (5.4%) |
| src/jalview/io/ | 773 (6.1%) | 10510 (5.4%) |
| src/jalview/datamodel/ | 743 (5.9%) | 8888 (4.5%) |
| utils/jalopy/docs/ | 277 (2.2%) | 8051 (4.1%) |
| src/jalview/jbgui/ | 412 (3.3%) | 6710 (3.4%) |
| src/jalview/analysis/ | 278 (2.2%) | 5842 (3.0%) |
| src/jalview/util/ | 155 (1.2%) | 5089 (2.6%) |
| utils/InstallAnywhere/ | 51 (0.4%) | 4553 (2.3%) |
| src/MCview/ | 214 (1.7%) | 4509 (2.3%) |
| src/jalview/schemes/ | 386 (3.0%) | 4038 (2.1%) |
| src/jalview/ws/jws1/ | 12 (0.1%) | 3749 (1.9%) |
| src/jalview/bin/ | 217 (1.7%) | 3214 (1.6%) |
| src/jalview/ws/jws2/ | 49 (0.4%) | 2594 (1.3%) |
| src/jalview/io/vamsas/ | 65 (0.5%) | 2565 (1.3%) |
| help/html/features/ | 294 (2.3%) | 2462 (1.3%) |
| src/ext/vamsas/ | 151 (1.2%) | 2335 (1.2%) |
| src/vamsas/objects/simple/ | 164 (1.3%) | 2199 (1.1%) |
| / | 133 (1.0%) | 1862 (0.9%) |
| src/org/jibble/epsgraphics/ | 12 (0.1%) | 1738 (0.9%) |
| src/jalview/commands/ | 81 (0.6%) | 1649 (0.8%) |
| src/jalview/datamodel/xdb/embl/ | 65 (0.5%) | 1636 (0.8%) |
| help/html/menus/ | 174 (1.4%) | 1573 (0.8%) |
| src/jalview/ext/jmol/ | 15 (0.1%) | 1545 (0.8%) |
| src/jalview/ws/ | 295 (2.3%) | 1502 (0.8%) |
| help/html/ | 151 (1.2%) | 1491 (0.8%) |
| src/uk/ac/ebi/www/ | 35 (0.3%) | 1464 (0.7%) |
| src/jalview/math/ | 20 (0.2%) | 1199 (0.6%) |
| help/html/colourSchemes/ | 106 (0.8%) | 1174 (0.6%) |
| src/jalview/schemabinding/version2/ | 886 (7.0%) | 1095 (0.6%) |
| src/jalview/structure/ | 51 (0.4%) | 901 (0.5%) |
| schemas/ | 68 (0.5%) | 658 (0.3%) |
| help/html/calculations/ | 83 (0.7%) | 576 (0.3%) |
| utils/ | 35 (0.3%) | 511 (0.3%) |
| help/html/webServices/ | 72 (0.6%) | 472 (0.2%) |
| src/com/stevesoft/pat/wrap/ | 18 (0.1%) | 468 (0.2%) |
| help/html/misc/ | 128 (1.0%) | 448 (0.2%) |
| src/jalview/schemabinding/version2/descriptors/ | 295 (2.3%) | 354 (0.2%) |
| src/jalview/ws/jws2/dm/ | 4 (0.0%) | 342 (0.2%) |
| src/jalview/ws/dbsources/ | 87 (0.7%) | 297 (0.2%) |
| utils/eclipse/ | 2 (0.0%) | 286 (0.1%) |
| help/ | 109 (0.9%) | 275 (0.1%) |
| help/html/io/ | 33 (0.3%) | 265 (0.1%) |
| src/jalview/ws/params/ | 9 (0.1%) | 233 (0.1%) |
| help/html/vamsas/ | 9 (0.1%) | 136 (0.1%) |
| doc/ | 28 (0.2%) | 132 (0.1%) |
| utils/jalopy/bin/ | 3 (0.0%) | 121 (0.1%) |
| resources/ | 14 (0.1%) | 98 (0.0%) |
| help/html/editing/ | 14 (0.1%) | 73 (0.0%) |
| utils/jalopy/ | 4 (0.0%) | 70 (0.0%) |
| src/jalview/api/ | 5 (0.0%) | 49 (0.0%) |
| .externalToolBuilders/ | 3 (0.0%) | 48 (0.0%) |
| lib/ | 99 (0.8%) | 35 (0.0%) |
| src/vamsas/ | 7 (0.1%) | 31 (0.0%) |
| resources/images/ | 49 (0.4%) | 10 (0.0%) |
| src/jalview/ | 1 (0.0%) | 1 (0.0%) |
| website/version2/webstart/ | 34 (0.3%) | 0 (0.0%) |
| website/version2/examples/ | 46 (0.4%) | 0 (0.0%) |
| website/version2/ | 2 (0.0%) | 0 (0.0%) |
| website/Templates/ | 2 (0.0%) | 0 (0.0%) |
| website/ | 8 (0.1%) | 0 (0.0%) |
| utils/jalopy/lib/ | 8 (0.1%) | 0 (0.0%) |
| src/uk/ac/ebi/www/picr/AccessionMappingService/ | 16 (0.1%) | 0 (0.0%) |
| src/uk/ac/ebi/picr/model/ | 16 (0.1%) | 0 (0.0%) |
| src/org/biojava/dasobert/feature/ | 24 (0.2%) | 0 (0.0%) |
| src/org/biojava/dasobert/eventmodel/ | 25 (0.2%) | 0 (0.0%) |
| src/org/biojava/dasobert/dasregistry/ | 27 (0.2%) | 0 (0.0%) |
| src/org/biojava/dasobert/das2/io/ | 11 (0.1%) | 0 (0.0%) |
| src/org/biojava/dasobert/das2/ | 19 (0.1%) | 0 (0.0%) |
| src/org/biojava/dasobert/das/ | 42 (0.3%) | 0 (0.0%) |
| src/jalview/ws/seqfetcher/ | 18 (0.1%) | 0 (0.0%) |
| src/jalview/ws/ebi/ | 5 (0.0%) | 0 (0.0%) |
| src/jalview/ws/dbsources/das/ | 4 (0.0%) | 0 (0.0%) |
| src/jalview/jbappletgui/ | 55 (0.4%) | 0 (0.0%) |
| src/jalview/biojava/dasobert/eventmodel/ | 25 (0.2%) | 0 (0.0%) |
| src/jalview/biojava/dasobert/dasregistry/ | 30 (0.2%) | 0 (0.0%) |
| src/jalview/biojava/dasobert/das2/io/ | 15 (0.1%) | 0 (0.0%) |
| src/jalview/biojava/dasobert/das2/ | 25 (0.2%) | 0 (0.0%) |
| src/jalview/biojava/dasobert/das/ | 15 (0.1%) | 0 (0.0%) |
| src/ext/jemboss/soap/ | 11 (0.1%) | 0 (0.0%) |
| src/ext/jemboss/ | 4 (0.0%) | 0 (0.0%) |
| src/ | 2 (0.0%) | 0 (0.0%) |
| images/ | 24 (0.2%) | 0 (0.0%) |
| help/icons/ | 5 (0.0%) | 0 (0.0%) |
| help/html/whatsNew/ | 2 (0.0%) | 0 (0.0%) |
| help/html/images/ | 4 (0.0%) | 0 (0.0%) |
| dist/ | 47 (0.4%) | 0 (0.0%) |
| appletlib/ | 8 (0.1%) | 0 (0.0%) |
