Uses of Package
compbio.engine.client

Packages that use compbio.engine.client

Package	Description
compbio.engine
compbio.engine.client
compbio.engine.cluster.drmaa
compbio.engine.conf
compbio.engine.local
compbio.runner	Utilities commonly used by all runners.
compbio.runner.conservation
compbio.runner.disorder
compbio.runner.msa	Wrappers for native executables for multiple sequence alignment (msa)
compbio.runner.structure
compbio.ws.client	A command line client and web services testing client for JAva Bioinformatics Analysis Web Services.
compbio.ws.server

Classes in compbio.engine.client used by compbio.engine

Class and Description
ConfExecutable
ConfiguredExecutable
Executable Interface to a native executable.
Executable.ExecProvider

Classes in compbio.engine.client used by compbio.engine.client

Class and Description
CommandBuilder
CommandBuilder.Parameter
ConfExecutable
ConfiguredExecutable
Executable Interface to a native executable.
Executable.ExecProvider
PipedExecutable This is a marker interface to indicate that the output of the process must be captured.
RunConfiguration Value class for persisting ConfExecutable instances
SkeletalExecutable

Classes in compbio.engine.client used by compbio.engine.cluster.drmaa

Class and Description
ConfiguredExecutable
Executable Interface to a native executable.

Classes in compbio.engine.client used by compbio.engine.conf

Class and Description
Executable Interface to a native executable.

Classes in compbio.engine.client used by compbio.engine.local

Class and Description
ConfiguredExecutable

Classes in compbio.engine.client used by compbio.runner

Class and Description
ConfiguredExecutable
Executable Interface to a native executable.

Classes in compbio.engine.client used by compbio.runner.conservation

Class and Description
CommandBuilder
Executable Interface to a native executable.
Executable.ExecProvider
SkeletalExecutable

Classes in compbio.engine.client used by compbio.runner.disorder

Class and Description
CommandBuilder
Executable Interface to a native executable.
Executable.ExecProvider
PipedExecutable This is a marker interface to indicate that the output of the process must be captured.
SkeletalExecutable

Classes in compbio.engine.client used by compbio.runner.msa

Class and Description
CommandBuilder
Executable Interface to a native executable.
Executable.ExecProvider
PipedExecutable This is a marker interface to indicate that the output of the process must be captured.
SkeletalExecutable

Classes in compbio.engine.client used by compbio.runner.structure

Class and Description
Executable Interface to a native executable.
PipedExecutable This is a marker interface to indicate that the output of the process must be captured.
SkeletalExecutable

Classes in compbio.engine.client used by compbio.ws.client

Class and Description
Executable Interface to a native executable.

Classes in compbio.engine.client used by compbio.ws.server

Class and Description
ConfiguredExecutable
SkeletalExecutable