JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]JPred_RESTful_API_job.name2015-07-31 15:19 0 Job name flag file
[TXT]LOG2015-07-31 16:08 4.8KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[ ]jp_J16gb5O.align2015-07-31 15:56 206KPSIBLAST alignment in FASTA format
[TXT]jp_J16gb5O.als2015-07-31 15:56 5.6KAlscript command file for PS/PDF output
[ ]jp_J16gb5O.blast.gz2015-07-31 15:31 155MCompressed PSIBLAST output file
[TXT]jp_J16gb5O.coils.csv2015-07-31 15:56 2.4KCOILS output in CSV format
[ ]jp_J16gb5O.coilseq.lupas_142015-07-31 15:56 17KCOILS output, window length 14
[ ]jp_J16gb5O.coilseq.lupas_212015-07-31 15:56 17KCOILS output, window length 21
[ ]jp_J16gb5O.coilseq.lupas_282015-07-31 15:56 17KCOILS output, window length 28
[ ]jp_J16gb5O.concise2015-07-31 15:56 419KPrediction: coiled-coil, solvent, alignment
[ ]jp_J16gb5O.concise.blc2015-07-31 15:56 209KBLC format prediction and alignment data
[ ]jp_J16gb5O.concise.fasta2015-07-31 15:56 210KPrediction: coiled-coil, solvent, alignment
[ ]jp_J16gb5O.concise.pdf2015-07-31 15:57 1.4MPDF prediction and alignment data
[ ]jp_J16gb5O.concise.ps2015-07-31 15:56 26MPrediction: coiled-coil, solvent, alignment
[ ]jp_J16gb5O.fasta2015-07-31 15:21 419 Input query sequence in FASTA format
[ ]jp_J16gb5O.full_MSA.fasta2015-07-31 15:48 519MFull MSA before JPred filters in FASTA
[TXT]jp_J16gb5O.full_MSA.fasta.noGaps.html2015-07-31 16:08 20MFull MSA before JPred filters in FASTA
[TXT]jp_J16gb5O.full_MSA.fasta.withGaps.html2015-07-31 16:08 878MFull MSA before JPred filters in FASTA
[ ]jp_J16gb5O.hmm2015-07-31 15:56 75KHHMer2 profile of the alignment
[TXT]jp_J16gb5O.html2015-07-31 15:56 333KHTML prediction and alignment data
[ ]jp_J16gb5O.input2015-07-31 15:19 411 Raw input data for analysis
[ ]jp_J16gb5O.jalview2015-07-31 15:56 8.7KJalview annotation file for alignment
[ ]jp_J16gb5O.jnet2015-07-31 15:56 15KJnet secondary structure output
[TXT]jp_J16gb5O.profile2015-07-31 15:28 64KPSIBLAST profile from alignment
[ ]jp_J16gb5O.pssm2015-07-31 15:56 86KPSIBLAST PSSM for Jnet
[TXT]jp_J16gb5O.results.html2016-02-15 12:16 164KJPred results page
[TXT]jp_J16gb5O.results.html.tmp2015-07-31 16:08 164KJPred results page
[TXT]jp_J16gb5O.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_J16gb5O.results_jalview.html.tmp2015-07-31 16:08 17KJalview results options
[TXT]jp_J16gb5O.results_jalview_.html2016-02-15 12:16 13KHTML prediction and alignment data
[TXT]jp_J16gb5O.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_J16gb5O.results_jalview_app_.html2016-02-15 12:16 16KHTML prediction and alignment data
[ ]jp_J16gb5O.seq2015-07-31 15:19 419 Sequence data file
[TXT]jp_J16gb5O.simple.html2015-07-31 15:56 2.4KBrief HTML: sequence and prediction only
[TXT]jp_J16gb5O.svg.html2015-07-31 16:08 156KJalview SVG summary of results
[ ]jp_J16gb5O.tar.gz2015-07-31 16:09 215MArchive containing complete results
[ ]jp_J16gb5O_proteocache.json2015-07-31 16:11 306K 
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.