JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:14 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1a1xa_.name2015-04-17 15:54 0 Job name flag file
[ ]jp_FMvkFeH.align2015-04-17 16:14 18KPSIBLAST alignment in FASTA format
[TXT]jp_FMvkFeH.als2015-04-17 16:14 2.4KAlscript command file for PS/PDF output
[ ]jp_FMvkFeH.blast.gz2015-04-17 16:14 59KCompressed PSIBLAST output file
[TXT]jp_FMvkFeH.coils.csv2015-04-17 16:14 666 COILS output in CSV format
[ ]jp_FMvkFeH.coilseq.lupas_142015-04-17 16:14 4.5KCOILS output, window length 14
[ ]jp_FMvkFeH.coilseq.lupas_212015-04-17 16:14 4.5KCOILS output, window length 21
[ ]jp_FMvkFeH.coilseq.lupas_282015-04-17 16:14 4.5KCOILS output, window length 28
[ ]jp_FMvkFeH.concise2015-04-17 16:14 38KPrediction: coiled-coil, solvent, alignment
[ ]jp_FMvkFeH.concise.blc2015-04-17 16:14 19KBLC format prediction and alignment data
[ ]jp_FMvkFeH.concise.fasta2015-04-17 16:14 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_FMvkFeH.concise.pdf2015-04-17 16:14 128KPDF prediction and alignment data
[ ]jp_FMvkFeH.concise.ps2015-04-17 16:14 2.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_FMvkFeH.fasta2015-04-17 16:11 120 Input query sequence in FASTA format
[ ]jp_FMvkFeH.full_MSA.fasta2015-04-17 16:14 85KFull MSA before JPred filters in FASTA
[TXT]jp_FMvkFeH.full_MSA.fasta.noGaps.html2015-04-17 16:14 55KFull MSA before JPred filters in FASTA
[TXT]jp_FMvkFeH.full_MSA.fasta.withGaps.html2015-04-17 16:14 300KFull MSA before JPred filters in FASTA
[ ]jp_FMvkFeH.hmm2015-04-17 16:14 20KHHMer2 profile of the alignment
[TXT]jp_FMvkFeH.html2015-04-17 16:14 56KHTML prediction and alignment data
[ ]jp_FMvkFeH.input2015-04-17 15:54 113 Raw input data for analysis
[ ]jp_FMvkFeH.jalview2015-04-17 16:14 2.9KJalview annotation file for alignment
[ ]jp_FMvkFeH.jnet2015-04-17 16:14 3.9KJnet secondary structure output
[TXT]jp_FMvkFeH.profile2015-04-17 16:13 17KPSIBLAST profile from alignment
[ ]jp_FMvkFeH.pssm2015-04-17 16:14 23KPSIBLAST PSSM for Jnet
[TXT]jp_FMvkFeH.results.html2016-02-15 12:16 52KJPred results page
[TXT]jp_FMvkFeH.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FMvkFeH.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FMvkFeH.seq2015-04-17 15:54 120 Sequence data file
[TXT]jp_FMvkFeH.simple.html2015-04-17 16:14 1.3KBrief HTML: sequence and prediction only
[TXT]jp_FMvkFeH.svg.html2015-04-17 16:14 44KJalview SVG summary of results
[ ]jp_FMvkFeH.tar.gz2015-04-17 16:14 269KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.