JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:30 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1acoa1.name2015-04-17 18:22 0 Job name flag file
[ ]jp_OlE8gmr.align2015-04-17 22:29 200KPSIBLAST alignment in FASTA format
[TXT]jp_OlE8gmr.als2015-04-17 22:29 3.7KAlscript command file for PS/PDF output
[ ]jp_OlE8gmr.blast.gz2015-04-17 22:27 8.7MCompressed PSIBLAST output file
[TXT]jp_OlE8gmr.coils.csv2015-04-17 22:29 1.4KCOILS output in CSV format
[ ]jp_OlE8gmr.coilseq.lupas_142015-04-17 22:29 9.5KCOILS output, window length 14
[ ]jp_OlE8gmr.coilseq.lupas_212015-04-17 22:29 9.5KCOILS output, window length 21
[ ]jp_OlE8gmr.coilseq.lupas_282015-04-17 22:29 9.5KCOILS output, window length 28
[ ]jp_OlE8gmr.concise2015-04-17 22:29 395KPrediction: coiled-coil, solvent, alignment
[ ]jp_OlE8gmr.concise.blc2015-04-17 22:29 200KBLC format prediction and alignment data
[ ]jp_OlE8gmr.concise.fasta2015-04-17 22:29 202KPrediction: coiled-coil, solvent, alignment
[ ]jp_OlE8gmr.concise.pdf2015-04-17 22:29 1.2MPDF prediction and alignment data
[ ]jp_OlE8gmr.concise.ps2015-04-17 22:29 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_OlE8gmr.fasta2015-04-17 20:12 242 Input query sequence in FASTA format
[ ]jp_OlE8gmr.full_MSA.fasta2015-04-17 22:28 21MFull MSA before JPred filters in FASTA
[TXT]jp_OlE8gmr.full_MSA.fasta.noGaps.html2015-04-17 22:30 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_OlE8gmr.full_MSA.fasta.withGaps.html2015-04-17 22:30 56MFull MSA before JPred filters in FASTA
[ ]jp_OlE8gmr.hmm2015-04-17 22:29 42KHHMer2 profile of the alignment
[TXT]jp_OlE8gmr.html2015-04-17 22:29 374KHTML prediction and alignment data
[ ]jp_OlE8gmr.input2015-04-17 18:22 233 Raw input data for analysis
[ ]jp_OlE8gmr.jalview2015-04-17 22:29 5.3KJalview annotation file for alignment
[ ]jp_OlE8gmr.jnet2015-04-17 22:29 8.3KJnet secondary structure output
[TXT]jp_OlE8gmr.profile2015-04-17 22:18 36KPSIBLAST profile from alignment
[ ]jp_OlE8gmr.pssm2015-04-17 22:29 49KPSIBLAST PSSM for Jnet
[TXT]jp_OlE8gmr.results.html2016-02-15 12:16 100KJPred results page
[TXT]jp_OlE8gmr.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_OlE8gmr.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_OlE8gmr.seq2015-04-17 18:22 242 Sequence data file
[TXT]jp_OlE8gmr.simple.html2015-04-17 22:29 1.7KBrief HTML: sequence and prediction only
[TXT]jp_OlE8gmr.svg.html2015-04-17 22:30 92KJalview SVG summary of results
[ ]jp_OlE8gmr.tar.gz2015-04-17 22:30 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.