JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:44 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1acoa2.name2015-04-17 18:22 0 Job name flag file
[ ]jp_CtL7PAv.align2015-04-17 22:42 392KPSIBLAST alignment in FASTA format
[TXT]jp_CtL7PAv.als2015-04-17 22:42 6.9KAlscript command file for PS/PDF output
[ ]jp_CtL7PAv.blast.gz2015-04-17 22:37 26MCompressed PSIBLAST output file
[TXT]jp_CtL7PAv.coils.csv2015-04-17 22:42 3.1KCOILS output in CSV format
[ ]jp_CtL7PAv.coilseq.lupas_142015-04-17 22:42 22KCOILS output, window length 14
[ ]jp_CtL7PAv.coilseq.lupas_212015-04-17 22:42 22KCOILS output, window length 21
[ ]jp_CtL7PAv.coilseq.lupas_282015-04-17 22:42 22KCOILS output, window length 28
[ ]jp_CtL7PAv.concise2015-04-17 22:42 789KPrediction: coiled-coil, solvent, alignment
[ ]jp_CtL7PAv.concise.blc2015-04-17 22:42 395KBLC format prediction and alignment data
[ ]jp_CtL7PAv.concise.fasta2015-04-17 22:42 398KPrediction: coiled-coil, solvent, alignment
[ ]jp_CtL7PAv.concise.pdf2015-04-17 22:43 2.6MPDF prediction and alignment data
[ ]jp_CtL7PAv.concise.ps2015-04-17 22:42 49MPrediction: coiled-coil, solvent, alignment
[ ]jp_CtL7PAv.fasta2015-04-17 20:12 547 Input query sequence in FASTA format
[ ]jp_CtL7PAv.full_MSA.fasta2015-04-17 22:40 53MFull MSA before JPred filters in FASTA
[TXT]jp_CtL7PAv.full_MSA.fasta.noGaps.html2015-04-17 22:44 5.2MFull MSA before JPred filters in FASTA
[TXT]jp_CtL7PAv.full_MSA.fasta.withGaps.html2015-04-17 22:44 143MFull MSA before JPred filters in FASTA
[ ]jp_CtL7PAv.hmm2015-04-17 22:42 99KHHMer2 profile of the alignment
[TXT]jp_CtL7PAv.html2015-04-17 22:42 574KHTML prediction and alignment data
[ ]jp_CtL7PAv.input2015-04-17 18:22 534 Raw input data for analysis
[ ]jp_CtL7PAv.jalview2015-04-17 22:42 11KJalview annotation file for alignment
[ ]jp_CtL7PAv.jnet2015-04-17 22:42 19KJnet secondary structure output
[TXT]jp_CtL7PAv.profile2015-04-17 22:25 84KPSIBLAST profile from alignment
[ ]jp_CtL7PAv.pssm2015-04-17 22:42 113KPSIBLAST PSSM for Jnet
[TXT]jp_CtL7PAv.results.html2016-02-15 12:16 219KJPred results page
[TXT]jp_CtL7PAv.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_CtL7PAv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_CtL7PAv.seq2015-04-17 18:22 547 Sequence data file
[TXT]jp_CtL7PAv.simple.html2015-04-17 22:42 2.8KBrief HTML: sequence and prediction only
[TXT]jp_CtL7PAv.svg.html2015-04-17 22:44 211KJalview SVG summary of results
[ ]jp_CtL7PAv.tar.gz2015-04-17 22:45 43MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.