JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:14 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1af7a1.name2015-04-17 16:31 0 Job name flag file
[ ]jp_qeKj1eF.align2015-04-17 17:14 110KPSIBLAST alignment in FASTA format
[TXT]jp_qeKj1eF.als2015-04-17 17:14 1.8KAlscript command file for PS/PDF output
[ ]jp_qeKj1eF.blast.gz2015-04-17 17:13 490KCompressed PSIBLAST output file
[TXT]jp_qeKj1eF.coils.csv2015-04-17 17:14 516 COILS output in CSV format
[ ]jp_qeKj1eF.coilseq.lupas_142015-04-17 17:14 3.4KCOILS output, window length 14
[ ]jp_qeKj1eF.coilseq.lupas_212015-04-17 17:14 3.4KCOILS output, window length 21
[ ]jp_qeKj1eF.coilseq.lupas_282015-04-17 17:14 3.4KCOILS output, window length 28
[ ]jp_qeKj1eF.concise2015-04-17 17:14 208KPrediction: coiled-coil, solvent, alignment
[ ]jp_qeKj1eF.concise.blc2015-04-17 17:14 109KBLC format prediction and alignment data
[ ]jp_qeKj1eF.concise.fasta2015-04-17 17:14 111KPrediction: coiled-coil, solvent, alignment
[ ]jp_qeKj1eF.concise.pdf2015-04-17 17:14 650KPDF prediction and alignment data
[ ]jp_qeKj1eF.concise.ps2015-04-17 17:14 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_qeKj1eF.fasta2015-04-17 17:09 95 Input query sequence in FASTA format
[ ]jp_qeKj1eF.full_MSA.fasta2015-04-17 17:13 838KFull MSA before JPred filters in FASTA
[TXT]jp_qeKj1eF.full_MSA.fasta.noGaps.html2015-04-17 17:14 565KFull MSA before JPred filters in FASTA
[TXT]jp_qeKj1eF.full_MSA.fasta.withGaps.html2015-04-17 17:14 4.6MFull MSA before JPred filters in FASTA
[ ]jp_qeKj1eF.hmm2015-04-17 17:14 15KHHMer2 profile of the alignment
[TXT]jp_qeKj1eF.html2015-04-17 17:14 330KHTML prediction and alignment data
[ ]jp_qeKj1eF.input2015-04-17 16:31 88 Raw input data for analysis
[ ]jp_qeKj1eF.jalview2015-04-17 17:14 2.5KJalview annotation file for alignment
[ ]jp_qeKj1eF.jnet2015-04-17 17:14 3.0KJnet secondary structure output
[TXT]jp_qeKj1eF.profile2015-04-17 17:11 13KPSIBLAST profile from alignment
[ ]jp_qeKj1eF.pssm2015-04-17 17:14 17KPSIBLAST PSSM for Jnet
[TXT]jp_qeKj1eF.results.html2016-02-15 12:16 42KJPred results page
[TXT]jp_qeKj1eF.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_qeKj1eF.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_qeKj1eF.seq2015-04-17 16:31 95 Sequence data file
[TXT]jp_qeKj1eF.simple.html2015-04-17 17:14 1.1KBrief HTML: sequence and prediction only
[TXT]jp_qeKj1eF.svg.html2015-04-17 17:14 34KJalview SVG summary of results
[ ]jp_qeKj1eF.tar.gz2015-04-17 17:14 1.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.