JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:12 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1aola_.name2015-04-17 16:32 0 Job name flag file
[ ]jp_7Bh6tR9.align2015-04-17 17:11 42KPSIBLAST alignment in FASTA format
[TXT]jp_7Bh6tR9.als2015-04-17 17:11 2.8KAlscript command file for PS/PDF output
[ ]jp_7Bh6tR9.blast.gz2015-04-17 17:11 154KCompressed PSIBLAST output file
[TXT]jp_7Bh6tR9.coils.csv2015-04-17 17:11 1.4KCOILS output in CSV format
[ ]jp_7Bh6tR9.coilseq.lupas_142015-04-17 17:11 9.5KCOILS output, window length 14
[ ]jp_7Bh6tR9.coilseq.lupas_212015-04-17 17:11 9.5KCOILS output, window length 21
[ ]jp_7Bh6tR9.coilseq.lupas_282015-04-17 17:11 9.5KCOILS output, window length 28
[ ]jp_7Bh6tR9.concise2015-04-17 17:11 91KPrediction: coiled-coil, solvent, alignment
[ ]jp_7Bh6tR9.concise.blc2015-04-17 17:11 45KBLC format prediction and alignment data
[ ]jp_7Bh6tR9.concise.fasta2015-04-17 17:11 45KPrediction: coiled-coil, solvent, alignment
[ ]jp_7Bh6tR9.concise.pdf2015-04-17 17:11 269KPDF prediction and alignment data
[ ]jp_7Bh6tR9.concise.ps2015-04-17 17:11 5.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_7Bh6tR9.fasta2015-04-17 17:09 243 Input query sequence in FASTA format
[ ]jp_7Bh6tR9.full_MSA.fasta2015-04-17 17:11 283KFull MSA before JPred filters in FASTA
[TXT]jp_7Bh6tR9.full_MSA.fasta.noGaps.html2015-04-17 17:11 122KFull MSA before JPred filters in FASTA
[TXT]jp_7Bh6tR9.full_MSA.fasta.withGaps.html2015-04-17 17:11 1.2MFull MSA before JPred filters in FASTA
[ ]jp_7Bh6tR9.hmm2015-04-17 17:11 43KHHMer2 profile of the alignment
[TXT]jp_7Bh6tR9.html2015-04-17 17:11 91KHTML prediction and alignment data
[ ]jp_7Bh6tR9.input2015-04-17 16:32 234 Raw input data for analysis
[ ]jp_7Bh6tR9.jalview2015-04-17 17:11 5.2KJalview annotation file for alignment
[ ]jp_7Bh6tR9.jnet2015-04-17 17:11 8.3KJnet secondary structure output
[TXT]jp_7Bh6tR9.profile2015-04-17 17:11 36KPSIBLAST profile from alignment
[ ]jp_7Bh6tR9.pssm2015-04-17 17:11 49KPSIBLAST PSSM for Jnet
[TXT]jp_7Bh6tR9.results.html2016-02-15 12:16 95KJPred results page
[TXT]jp_7Bh6tR9.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_7Bh6tR9.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_7Bh6tR9.seq2015-04-17 16:32 243 Sequence data file
[TXT]jp_7Bh6tR9.simple.html2015-04-17 17:11 1.6KBrief HTML: sequence and prediction only
[TXT]jp_7Bh6tR9.svg.html2015-04-17 17:12 87KJalview SVG summary of results
[ ]jp_7Bh6tR9.tar.gz2015-04-17 17:12 634KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.