JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_rkqBHhq.als2015-04-17 21:16 1.8KAlscript command file for PS/PDF output
[ ]jp_rkqBHhq.tar.gz2015-04-17 21:17 791KArchive containing complete results
[ ]jp_rkqBHhq.concise.blc2015-04-17 21:16 48KBLC format prediction and alignment data
[TXT]jp_rkqBHhq.simple.html2015-04-17 21:16 1.3KBrief HTML: sequence and prediction only
[TXT]jp_rkqBHhq.coils.csv2015-04-17 21:16 1.1KCOILS output in CSV format
[ ]jp_rkqBHhq.coilseq.lupas_142015-04-17 21:16 7.4KCOILS output, window length 14
[ ]jp_rkqBHhq.coilseq.lupas_212015-04-17 21:16 7.4KCOILS output, window length 21
[ ]jp_rkqBHhq.coilseq.lupas_282015-04-17 21:16 7.4KCOILS output, window length 28
[ ]jp_rkqBHhq.blast.gz2015-04-17 21:16 242KCompressed PSIBLAST output file
[ ]jp_rkqBHhq.full_MSA.fasta2015-04-17 21:16 464KFull MSA before JPred filters in FASTA
[TXT]jp_rkqBHhq.full_MSA.fasta.noGaps.html2015-04-17 21:16 146KFull MSA before JPred filters in FASTA
[TXT]jp_rkqBHhq.full_MSA.fasta.withGaps.html2015-04-17 21:16 1.5MFull MSA before JPred filters in FASTA
[ ]jp_rkqBHhq.hmm2015-04-17 21:16 33KHHMer2 profile of the alignment
[TXT]jp_rkqBHhq.html2015-04-17 21:16 116KHTML prediction and alignment data
[TXT]jp_rkqBHhq.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_rkqBHhq.fasta2015-04-17 21:09 192 Input query sequence in FASTA format
[TXT]jp_rkqBHhq.results.html2016-02-15 12:16 76KJPred results page
[TXT]LOG2015-04-17 21:17 4.7KJPred server log file
[TXT]jp_rkqBHhq.svg.html2015-04-17 21:16 68KJalview SVG summary of results
[ ]jp_rkqBHhq.jalview2015-04-17 21:16 4.5KJalview annotation file for alignment
[TXT]jp_rkqBHhq.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_rkqBHhq.jnet2015-04-17 21:16 6.5KJnet secondary structure output
[TXT]d1bg1a1.name2015-04-17 18:59 0 Job name flag file
[ ]jp_rkqBHhq.concise.pdf2015-04-17 21:16 316KPDF prediction and alignment data
[ ]jp_rkqBHhq.pssm2015-04-17 21:16 38KPSIBLAST PSSM for Jnet
[ ]jp_rkqBHhq.align2015-04-17 21:16 46KPSIBLAST alignment in FASTA format
[TXT]jp_rkqBHhq.profile2015-04-17 21:13 29KPSIBLAST profile from alignment
[ ]jp_rkqBHhq.concise2015-04-17 21:16 95KPrediction: coiled-coil, solvent, alignment
[ ]jp_rkqBHhq.concise.fasta2015-04-17 21:16 48KPrediction: coiled-coil, solvent, alignment
[ ]jp_rkqBHhq.concise.ps2015-04-17 21:16 5.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_rkqBHhq.input2015-04-17 18:59 184 Raw input data for analysis
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[ ]jp_rkqBHhq.seq2015-04-17 18:59 192 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.