A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:18 | 4.7K | JPred server log file |
| README | 2016-02-15 12:16 | 2.1K | Results file descriptions |
| d1bkra_.name | 2015-04-17 18:22 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_LdMoW50.align | 2015-04-17 20:18 | 47K | PSIBLAST alignment in FASTA format |
| jp_LdMoW50.als | 2015-04-17 20:18 | 1.8K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_LdMoW50.blast.gz | 2015-04-17 20:17 | 2.7M | Compressed PSIBLAST output file |
| jp_LdMoW50.coils.csv | 2015-04-17 20:18 | 678 | COILS output in CSV format |
| jp_LdMoW50.coilseq.lupas_14 | 2015-04-17 20:18 | 4.5K | COILS output, window length 14 |
| jp_LdMoW50.coilseq.lupas_21 | 2015-04-17 20:18 | 4.5K | COILS output, window length 21 |
| jp_LdMoW50.coilseq.lupas_28 | 2015-04-17 20:18 | 4.5K | COILS output, window length 28 |
| jp_LdMoW50.concise | 2015-04-17 20:18 | 93K | Prediction: coiled-coil, solvent, alignment |
| jp_LdMoW50.concise.blc | 2015-04-17 20:18 | 48K | BLC format prediction and alignment data |
| jp_LdMoW50.concise.fasta | 2015-04-17 20:18 | 48K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_LdMoW50.concise.pdf | 2015-04-17 20:18 | 306K | PDF prediction and alignment data |
| jp_LdMoW50.concise.ps | 2015-04-17 20:18 | 5.4M | Prediction: coiled-coil, solvent, alignment |
| jp_LdMoW50.fasta | 2015-04-17 20:13 | 122 | Input query sequence in FASTA format |
| jp_LdMoW50.full_MSA.fasta | 2015-04-17 20:17 | 5.4M | Full MSA before JPred filters in FASTA |
| jp_LdMoW50.full_MSA.fasta.noGaps.html | 2015-04-17 20:18 | 1.1M | Full MSA before JPred filters in FASTA |
| jp_LdMoW50.full_MSA.fasta.withGaps.html | 2015-04-17 20:18 | 16M | Full MSA before JPred filters in FASTA |
| jp_LdMoW50.hmm | 2015-04-17 20:18 | 20K | HHMer2 profile of the alignment |
| jp_LdMoW50.html | 2015-04-17 20:18 | 129K | HTML prediction and alignment data |
| jp_LdMoW50.input | 2015-04-17 18:22 | 115 | Raw input data for analysis |
| jp_LdMoW50.jalview | 2015-04-17 20:18 | 3.0K | Jalview annotation file for alignment |
| jp_LdMoW50.jnet | 2015-04-17 20:18 | 4.0K | Jnet secondary structure output |
| jp_LdMoW50.profile | 2015-04-17 20:16 | 18K | PSIBLAST profile from alignment |
| jp_LdMoW50.pssm | 2015-04-17 20:18 | 23K | PSIBLAST PSSM for Jnet |
| jp_LdMoW50.results.html | 2016-02-15 12:16 | 52K | JPred results page |
| jp_LdMoW50.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_LdMoW50.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_LdMoW50.seq | 2015-04-17 18:22 | 122 | Sequence data file |
| jp_LdMoW50.simple.html | 2015-04-17 20:18 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_LdMoW50.svg.html) | jp_LdMoW50.svg.html | 2015-04-17 20:18 | 44K | Jalview SVG summary of results |
| jp_LdMoW50.tar.gz | 2015-04-17 20:18 | 4.1M | Archive containing complete results |
