JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:15 4.9KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1bm8a_.name2015-04-17 17:08 0 Job name flag file
[ ]jp_uRRjhLo.align2015-04-17 18:15 37KPSIBLAST alignment in FASTA format
[TXT]jp_uRRjhLo.als2015-04-17 18:15 2.6KAlscript command file for PS/PDF output
[ ]jp_uRRjhLo.blast.gz2015-04-17 18:15 278KCompressed PSIBLAST output file
[TXT]jp_uRRjhLo.coils.csv2015-04-17 18:15 624 COILS output in CSV format
[ ]jp_uRRjhLo.coilseq.lupas_142015-04-17 18:15 4.2KCOILS output, window length 14
[ ]jp_uRRjhLo.coilseq.lupas_212015-04-17 18:15 4.2KCOILS output, window length 21
[ ]jp_uRRjhLo.coilseq.lupas_282015-04-17 18:15 4.2KCOILS output, window length 28
[ ]jp_uRRjhLo.concise2015-04-17 18:15 75KPrediction: coiled-coil, solvent, alignment
[ ]jp_uRRjhLo.concise.blc2015-04-17 18:15 38KBLC format prediction and alignment data
[ ]jp_uRRjhLo.concise.fasta2015-04-17 18:15 39KPrediction: coiled-coil, solvent, alignment
[ ]jp_uRRjhLo.concise.pdf2015-04-17 18:15 2.2KPDF prediction and alignment data
[ ]jp_uRRjhLo.concise.ps2015-04-17 18:15 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_uRRjhLo.fasta2015-04-17 18:11 113 Input query sequence in FASTA format
[ ]jp_uRRjhLo.full_MSA.fasta2015-04-17 18:15 586KFull MSA before JPred filters in FASTA
[TXT]jp_uRRjhLo.full_MSA.fasta.noGaps.html2015-04-17 18:15 207KFull MSA before JPred filters in FASTA
[TXT]jp_uRRjhLo.full_MSA.fasta.withGaps.html2015-04-17 18:15 2.1MFull MSA before JPred filters in FASTA
[ ]jp_uRRjhLo.hmm2015-04-17 18:15 19KHHMer2 profile of the alignment
[TXT]jp_uRRjhLo.html2015-04-17 18:15 110KHTML prediction and alignment data
[ ]jp_uRRjhLo.input2015-04-17 17:08 106 Raw input data for analysis
[ ]jp_uRRjhLo.jalview2015-04-17 18:15 2.8KJalview annotation file for alignment
[ ]jp_uRRjhLo.jnet2015-04-17 18:15 3.7KJnet secondary structure output
[TXT]jp_uRRjhLo.profile2015-04-17 18:14 16KPSIBLAST profile from alignment
[ ]jp_uRRjhLo.pssm2015-04-17 18:15 21KPSIBLAST PSSM for Jnet
[TXT]jp_uRRjhLo.results.html2016-02-15 12:16 51KJPred results page
[TXT]jp_uRRjhLo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_uRRjhLo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_uRRjhLo.seq2015-04-17 17:08 113 Sequence data file
[TXT]jp_uRRjhLo.simple.html2015-04-17 18:15 1.3KBrief HTML: sequence and prediction only
[TXT]jp_uRRjhLo.svg.html2015-04-17 18:15 43KJalview SVG summary of results
[ ]jp_uRRjhLo.tar.gz2015-04-17 18:15 549KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.