JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:52 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1boua_.name2015-04-17 15:54 0 Job name flag file
[ ]jp_JPYACb6.align2015-04-17 16:52 25KPSIBLAST alignment in FASTA format
[TXT]jp_JPYACb6.als2015-04-17 16:52 2.5KAlscript command file for PS/PDF output
[ ]jp_JPYACb6.blast.gz2015-04-17 16:52 68KCompressed PSIBLAST output file
[TXT]jp_JPYACb6.coils.csv2015-04-17 16:52 822 COILS output in CSV format
[ ]jp_JPYACb6.coilseq.lupas_142015-04-17 16:52 5.5KCOILS output, window length 14
[ ]jp_JPYACb6.coilseq.lupas_212015-04-17 16:52 5.5KCOILS output, window length 21
[ ]jp_JPYACb6.coilseq.lupas_282015-04-17 16:52 5.5KCOILS output, window length 28
[ ]jp_JPYACb6.concise2015-04-17 16:52 53KPrediction: coiled-coil, solvent, alignment
[ ]jp_JPYACb6.concise.blc2015-04-17 16:52 26KBLC format prediction and alignment data
[ ]jp_JPYACb6.concise.fasta2015-04-17 16:52 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_JPYACb6.concise.pdf2015-04-17 16:52 154KPDF prediction and alignment data
[ ]jp_JPYACb6.concise.ps2015-04-17 16:52 3.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_JPYACb6.fasta2015-04-17 16:12 146 Input query sequence in FASTA format
[ ]jp_JPYACb6.full_MSA.fasta2015-04-17 16:52 85KFull MSA before JPred filters in FASTA
[TXT]jp_JPYACb6.full_MSA.fasta.noGaps.html2015-04-17 16:52 83KFull MSA before JPred filters in FASTA
[TXT]jp_JPYACb6.full_MSA.fasta.withGaps.html2015-04-17 16:52 315KFull MSA before JPred filters in FASTA
[ ]jp_JPYACb6.hmm2015-04-17 16:52 25KHHMer2 profile of the alignment
[TXT]jp_JPYACb6.html2015-04-17 16:52 71KHTML prediction and alignment data
[ ]jp_JPYACb6.input2015-04-17 15:54 139 Raw input data for analysis
[ ]jp_JPYACb6.jalview2015-04-17 16:52 3.5KJalview annotation file for alignment
[ ]jp_JPYACb6.jnet2015-04-17 16:52 4.9KJnet secondary structure output
[TXT]jp_JPYACb6.profile2015-04-17 16:39 21KPSIBLAST profile from alignment
[ ]jp_JPYACb6.pssm2015-04-17 16:52 28KPSIBLAST PSSM for Jnet
[TXT]jp_JPYACb6.results.html2016-02-15 12:16 64KJPred results page
[TXT]jp_JPYACb6.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_JPYACb6.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_JPYACb6.seq2015-04-17 15:54 146 Sequence data file
[TXT]jp_JPYACb6.simple.html2015-04-17 16:52 1.3KBrief HTML: sequence and prediction only
[TXT]jp_JPYACb6.svg.html2015-04-17 16:52 56KJalview SVG summary of results
[ ]jp_JPYACb6.tar.gz2015-04-17 16:52 325KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.