JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:18 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1boub_.name2015-04-17 15:55 0 Job name flag file
[ ]jp_j7w4N8u.align2015-04-17 16:17 270KPSIBLAST alignment in FASTA format
[TXT]jp_j7w4N8u.als2015-04-17 16:17 4.0KAlscript command file for PS/PDF output
[ ]jp_j7w4N8u.blast.gz2015-04-17 16:16 3.0MCompressed PSIBLAST output file
[TXT]jp_j7w4N8u.coils.csv2015-04-17 16:17 1.8KCOILS output in CSV format
[ ]jp_j7w4N8u.coilseq.lupas_142015-04-17 16:17 13KCOILS output, window length 14
[ ]jp_j7w4N8u.coilseq.lupas_212015-04-17 16:17 13KCOILS output, window length 21
[ ]jp_j7w4N8u.coilseq.lupas_282015-04-17 16:17 13KCOILS output, window length 28
[ ]jp_j7w4N8u.concise2015-04-17 16:17 535KPrediction: coiled-coil, solvent, alignment
[ ]jp_j7w4N8u.concise.blc2015-04-17 16:17 270KBLC format prediction and alignment data
[ ]jp_j7w4N8u.concise.fasta2015-04-17 16:17 273KPrediction: coiled-coil, solvent, alignment
[ ]jp_j7w4N8u.concise.pdf2015-04-17 16:18 1.8MPDF prediction and alignment data
[ ]jp_j7w4N8u.concise.ps2015-04-17 16:17 32MPrediction: coiled-coil, solvent, alignment
[ ]jp_j7w4N8u.fasta2015-04-17 16:13 315 Input query sequence in FASTA format
[ ]jp_j7w4N8u.full_MSA.fasta2015-04-17 16:17 10MFull MSA before JPred filters in FASTA
[TXT]jp_j7w4N8u.full_MSA.fasta.noGaps.html2015-04-17 16:18 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_j7w4N8u.full_MSA.fasta.withGaps.html2015-04-17 16:18 30MFull MSA before JPred filters in FASTA
[ ]jp_j7w4N8u.hmm2015-04-17 16:17 56KHHMer2 profile of the alignment
[TXT]jp_j7w4N8u.html2015-04-17 16:17 461KHTML prediction and alignment data
[ ]jp_j7w4N8u.input2015-04-17 15:55 305 Raw input data for analysis
[ ]jp_j7w4N8u.jalview2015-04-17 16:17 6.8KJalview annotation file for alignment
[ ]jp_j7w4N8u.jnet2015-04-17 16:17 11KJnet secondary structure output
[TXT]jp_j7w4N8u.profile2015-04-17 16:15 48KPSIBLAST profile from alignment
[ ]jp_j7w4N8u.pssm2015-04-17 16:17 64KPSIBLAST PSSM for Jnet
[TXT]jp_j7w4N8u.results.html2016-02-15 12:16 126KJPred results page
[TXT]jp_j7w4N8u.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_j7w4N8u.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_j7w4N8u.seq2015-04-17 15:55 315 Sequence data file
[TXT]jp_j7w4N8u.simple.html2015-04-17 16:17 1.9KBrief HTML: sequence and prediction only
[TXT]jp_j7w4N8u.svg.html2015-04-17 16:18 118KJalview SVG summary of results
[ ]jp_j7w4N8u.tar.gz2015-04-17 16:18 8.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.