JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:04 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1c75a_.name2015-04-17 14:59 0 Job name flag file
[ ]jp_TArpCl8.align2015-04-17 15:03 82KPSIBLAST alignment in FASTA format
[TXT]jp_TArpCl8.als2015-04-17 15:03 1.6KAlscript command file for PS/PDF output
[ ]jp_TArpCl8.blast.gz2015-04-17 15:02 3.4MCompressed PSIBLAST output file
[TXT]jp_TArpCl8.coils.csv2015-04-17 15:03 456 COILS output in CSV format
[ ]jp_TArpCl8.coilseq.lupas_142015-04-17 15:03 3.0KCOILS output, window length 14
[ ]jp_TArpCl8.coilseq.lupas_212015-04-17 15:03 3.0KCOILS output, window length 21
[ ]jp_TArpCl8.coilseq.lupas_282015-04-17 15:03 3.0KCOILS output, window length 28
[ ]jp_TArpCl8.concise2015-04-17 15:03 157KPrediction: coiled-coil, solvent, alignment
[ ]jp_TArpCl8.concise.blc2015-04-17 15:03 83KBLC format prediction and alignment data
[ ]jp_TArpCl8.concise.fasta2015-04-17 15:03 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_TArpCl8.concise.pdf2015-04-17 15:03 498KPDF prediction and alignment data
[ ]jp_TArpCl8.concise.ps2015-04-17 15:03 8.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_TArpCl8.fasta2015-04-17 14:59 84 Input query sequence in FASTA format
[ ]jp_TArpCl8.full_MSA.fasta2015-04-17 15:03 12MFull MSA before JPred filters in FASTA
[TXT]jp_TArpCl8.full_MSA.fasta.noGaps.html2015-04-17 15:03 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_TArpCl8.full_MSA.fasta.withGaps.html2015-04-17 15:03 31MFull MSA before JPred filters in FASTA
[ ]jp_TArpCl8.hmm2015-04-17 15:03 13KHHMer2 profile of the alignment
[TXT]jp_TArpCl8.html2015-04-17 15:03 268KHTML prediction and alignment data
[ ]jp_TArpCl8.input2015-04-17 14:59 78 Raw input data for analysis
[ ]jp_TArpCl8.jalview2015-04-17 15:03 2.2KJalview annotation file for alignment
[ ]jp_TArpCl8.jnet2015-04-17 15:03 2.7KJnet secondary structure output
[TXT]jp_TArpCl8.profile2015-04-17 15:01 12KPSIBLAST profile from alignment
[ ]jp_TArpCl8.pssm2015-04-17 15:03 15KPSIBLAST PSSM for Jnet
[TXT]jp_TArpCl8.results.html2016-02-15 12:16 38KJPred results page
[TXT]jp_TArpCl8.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_TArpCl8.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_TArpCl8.seq2015-04-17 14:59 84 Sequence data file
[TXT]jp_TArpCl8.simple.html2015-04-17 15:03 1.1KBrief HTML: sequence and prediction only
[TXT]jp_TArpCl8.svg.html2015-04-17 15:04 30KJalview SVG summary of results
[ ]jp_TArpCl8.tar.gz2015-04-17 15:04 7.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.