JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:19 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1ccwb_.name2015-04-17 15:55 0 Job name flag file
[ ]jp_7GwEGsw.align2015-04-17 16:19 71KPSIBLAST alignment in FASTA format
[TXT]jp_7GwEGsw.als2015-04-17 16:19 5.7KAlscript command file for PS/PDF output
[ ]jp_7GwEGsw.blast.gz2015-04-17 16:19 185KCompressed PSIBLAST output file
[TXT]jp_7GwEGsw.coils.csv2015-04-17 16:19 2.9KCOILS output in CSV format
[ ]jp_7GwEGsw.coilseq.lupas_142015-04-17 16:19 20KCOILS output, window length 14
[ ]jp_7GwEGsw.coilseq.lupas_212015-04-17 16:19 20KCOILS output, window length 21
[ ]jp_7GwEGsw.coilseq.lupas_282015-04-17 16:19 20KCOILS output, window length 28
[ ]jp_7GwEGsw.concise2015-04-17 16:19 159KPrediction: coiled-coil, solvent, alignment
[ ]jp_7GwEGsw.concise.blc2015-04-17 16:19 77KBLC format prediction and alignment data
[ ]jp_7GwEGsw.concise.fasta2015-04-17 16:19 76KPrediction: coiled-coil, solvent, alignment
[ ]jp_7GwEGsw.concise.pdf2015-04-17 16:19 519KPDF prediction and alignment data
[ ]jp_7GwEGsw.concise.ps2015-04-17 16:19 9.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_7GwEGsw.fasta2015-04-17 16:14 502 Input query sequence in FASTA format
[ ]jp_7GwEGsw.full_MSA.fasta2015-04-17 16:19 331KFull MSA before JPred filters in FASTA
[TXT]jp_7GwEGsw.full_MSA.fasta.noGaps.html2015-04-17 16:19 200KFull MSA before JPred filters in FASTA
[TXT]jp_7GwEGsw.full_MSA.fasta.withGaps.html2015-04-17 16:19 1.4MFull MSA before JPred filters in FASTA
[ ]jp_7GwEGsw.hmm2015-04-17 16:19 91KHHMer2 profile of the alignment
[TXT]jp_7GwEGsw.html2015-04-17 16:19 146KHTML prediction and alignment data
[ ]jp_7GwEGsw.input2015-04-17 15:55 490 Raw input data for analysis
[ ]jp_7GwEGsw.jalview2015-04-17 16:19 11KJalview annotation file for alignment
[ ]jp_7GwEGsw.jnet2015-04-17 16:19 18KJnet secondary structure output
[TXT]jp_7GwEGsw.profile2015-04-17 16:17 77KPSIBLAST profile from alignment
[ ]jp_7GwEGsw.pssm2015-04-17 16:19 104KPSIBLAST PSSM for Jnet
[TXT]jp_7GwEGsw.results.html2016-02-15 12:16 200KJPred results page
[TXT]jp_7GwEGsw.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_7GwEGsw.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_7GwEGsw.seq2015-04-17 15:55 502 Sequence data file
[TXT]jp_7GwEGsw.simple.html2015-04-17 16:19 2.6KBrief HTML: sequence and prediction only
[TXT]jp_7GwEGsw.svg.html2015-04-17 16:19 191KJalview SVG summary of results
[ ]jp_7GwEGsw.tar.gz2015-04-17 16:19 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.