JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:18 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1ciya2.name2015-04-17 18:23 0 Job name flag file
[ ]jp_ggL7QGo.align2015-04-17 20:18 40KPSIBLAST alignment in FASTA format
[TXT]jp_ggL7QGo.als2015-04-17 20:18 3.1KAlscript command file for PS/PDF output
[ ]jp_ggL7QGo.blast.gz2015-04-17 20:18 154KCompressed PSIBLAST output file
[TXT]jp_ggL7QGo.coils.csv2015-04-17 20:18 1.2KCOILS output in CSV format
[ ]jp_ggL7QGo.coilseq.lupas_142015-04-17 20:18 8.7KCOILS output, window length 14
[ ]jp_ggL7QGo.coilseq.lupas_212015-04-17 20:18 8.7KCOILS output, window length 21
[ ]jp_ggL7QGo.coilseq.lupas_282015-04-17 20:18 8.7KCOILS output, window length 28
[ ]jp_ggL7QGo.concise2015-04-17 20:18 85KPrediction: coiled-coil, solvent, alignment
[ ]jp_ggL7QGo.concise.blc2015-04-17 20:18 42KBLC format prediction and alignment data
[ ]jp_ggL7QGo.concise.fasta2015-04-17 20:18 42KPrediction: coiled-coil, solvent, alignment
[ ]jp_ggL7QGo.concise.pdf2015-04-17 20:18 298KPDF prediction and alignment data
[ ]jp_ggL7QGo.concise.ps2015-04-17 20:18 5.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_ggL7QGo.fasta2015-04-17 20:14 221 Input query sequence in FASTA format
[ ]jp_ggL7QGo.full_MSA.fasta2015-04-17 20:18 278KFull MSA before JPred filters in FASTA
[TXT]jp_ggL7QGo.full_MSA.fasta.noGaps.html2015-04-17 20:18 86KFull MSA before JPred filters in FASTA
[TXT]jp_ggL7QGo.full_MSA.fasta.withGaps.html2015-04-17 20:18 1.2MFull MSA before JPred filters in FASTA
[ ]jp_ggL7QGo.hmm2015-04-17 20:18 39KHHMer2 profile of the alignment
[TXT]jp_ggL7QGo.html2015-04-17 20:18 91KHTML prediction and alignment data
[ ]jp_ggL7QGo.input2015-04-17 18:23 213 Raw input data for analysis
[ ]jp_ggL7QGo.jalview2015-04-17 20:18 4.9KJalview annotation file for alignment
[ ]jp_ggL7QGo.jnet2015-04-17 20:18 7.6KJnet secondary structure output
[TXT]jp_ggL7QGo.profile2015-04-17 20:17 33KPSIBLAST profile from alignment
[ ]jp_ggL7QGo.pssm2015-04-17 20:18 44KPSIBLAST PSSM for Jnet
[TXT]jp_ggL7QGo.results.html2016-02-15 12:16 89KJPred results page
[TXT]jp_ggL7QGo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_ggL7QGo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_ggL7QGo.seq2015-04-17 18:23 221 Sequence data file
[TXT]jp_ggL7QGo.simple.html2015-04-17 20:18 1.5KBrief HTML: sequence and prediction only
[TXT]jp_ggL7QGo.svg.html2015-04-17 20:18 81KJalview SVG summary of results
[ ]jp_ggL7QGo.tar.gz2015-04-17 20:18 689KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.