JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:16 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1ciya3.name2015-04-17 17:46 0 Job name flag file
[ ]jp_NM3scwv.align2015-04-17 19:16 80KPSIBLAST alignment in FASTA format
[TXT]jp_NM3scwv.als2015-04-17 19:16 2.4KAlscript command file for PS/PDF output
[ ]jp_NM3scwv.blast.gz2015-04-17 19:16 446KCompressed PSIBLAST output file
[TXT]jp_NM3scwv.coils.csv2015-04-17 19:16 1.3KCOILS output in CSV format
[ ]jp_NM3scwv.coilseq.lupas_142015-04-17 19:16 9.4KCOILS output, window length 14
[ ]jp_NM3scwv.coilseq.lupas_212015-04-17 19:16 9.4KCOILS output, window length 21
[ ]jp_NM3scwv.coilseq.lupas_282015-04-17 19:16 9.4KCOILS output, window length 28
[ ]jp_NM3scwv.concise2015-04-17 19:16 163KPrediction: coiled-coil, solvent, alignment
[ ]jp_NM3scwv.concise.blc2015-04-17 19:16 82KBLC format prediction and alignment data
[ ]jp_NM3scwv.concise.fasta2015-04-17 19:16 82KPrediction: coiled-coil, solvent, alignment
[ ]jp_NM3scwv.concise.pdf2015-04-17 19:16 562KPDF prediction and alignment data
[ ]jp_NM3scwv.concise.ps2015-04-17 19:16 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_NM3scwv.fasta2015-04-17 19:11 239 Input query sequence in FASTA format
[ ]jp_NM3scwv.full_MSA.fasta2015-04-17 19:16 837KFull MSA before JPred filters in FASTA
[TXT]jp_NM3scwv.full_MSA.fasta.noGaps.html2015-04-17 19:16 169KFull MSA before JPred filters in FASTA
[TXT]jp_NM3scwv.full_MSA.fasta.withGaps.html2015-04-17 19:16 2.6MFull MSA before JPred filters in FASTA
[ ]jp_NM3scwv.hmm2015-04-17 19:16 42KHHMer2 profile of the alignment
[TXT]jp_NM3scwv.html2015-04-17 19:16 170KHTML prediction and alignment data
[ ]jp_NM3scwv.input2015-04-17 17:46 230 Raw input data for analysis
[ ]jp_NM3scwv.jalview2015-04-17 19:16 5.5KJalview annotation file for alignment
[ ]jp_NM3scwv.jnet2015-04-17 19:16 8.2KJnet secondary structure output
[TXT]jp_NM3scwv.profile2015-04-17 19:14 36KPSIBLAST profile from alignment
[ ]jp_NM3scwv.pssm2015-04-17 19:16 48KPSIBLAST PSSM for Jnet
[TXT]jp_NM3scwv.results.html2016-02-15 12:16 95KJPred results page
[TXT]jp_NM3scwv.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_NM3scwv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_NM3scwv.seq2015-04-17 17:46 239 Sequence data file
[TXT]jp_NM3scwv.simple.html2015-04-17 19:16 1.5KBrief HTML: sequence and prediction only
[TXT]jp_NM3scwv.svg.html2015-04-17 19:16 87KJalview SVG summary of results
[ ]jp_NM3scwv.tar.gz2015-04-17 19:16 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.