JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:09 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1cola_.name2015-04-17 15:03 0 Job name flag file
[ ]jp_ESNMAG7.align2015-04-17 15:09 11KPSIBLAST alignment in FASTA format
[TXT]jp_ESNMAG7.als2015-04-17 15:09 2.2KAlscript command file for PS/PDF output
[ ]jp_ESNMAG7.blast.gz2015-04-17 15:09 25KCompressed PSIBLAST output file
[TXT]jp_ESNMAG7.coils.csv2015-04-17 15:09 1.2KCOILS output in CSV format
[ ]jp_ESNMAG7.coilseq.lupas_142015-04-17 15:09 8.3KCOILS output, window length 14
[ ]jp_ESNMAG7.coilseq.lupas_212015-04-17 15:09 8.3KCOILS output, window length 21
[ ]jp_ESNMAG7.coilseq.lupas_282015-04-17 15:09 8.3KCOILS output, window length 28
[ ]jp_ESNMAG7.concise2015-04-17 15:09 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_ESNMAG7.concise.blc2015-04-17 15:09 14KBLC format prediction and alignment data
[ ]jp_ESNMAG7.concise.fasta2015-04-17 15:09 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_ESNMAG7.concise.pdf2015-04-17 15:09 86KPDF prediction and alignment data
[ ]jp_ESNMAG7.concise.ps2015-04-17 15:09 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_ESNMAG7.fasta2015-04-17 15:03 212 Input query sequence in FASTA format
[ ]jp_ESNMAG7.full_MSA.fasta2015-04-17 15:09 20KFull MSA before JPred filters in FASTA
[TXT]jp_ESNMAG7.full_MSA.fasta.noGaps.html2015-04-17 15:09 31KFull MSA before JPred filters in FASTA
[TXT]jp_ESNMAG7.full_MSA.fasta.withGaps.html2015-04-17 15:09 36KFull MSA before JPred filters in FASTA
[ ]jp_ESNMAG7.hmm2015-04-17 15:09 37KHHMer2 profile of the alignment
[TXT]jp_ESNMAG7.html2015-04-17 15:09 45KHTML prediction and alignment data
[ ]jp_ESNMAG7.input2015-04-17 15:03 204 Raw input data for analysis
[ ]jp_ESNMAG7.jalview2015-04-17 15:09 5.0KJalview annotation file for alignment
[ ]jp_ESNMAG7.jnet2015-04-17 15:09 7.2KJnet secondary structure output
[TXT]jp_ESNMAG7.profile2015-04-17 15:07 32KPSIBLAST profile from alignment
[ ]jp_ESNMAG7.pssm2015-04-17 15:09 42KPSIBLAST PSSM for Jnet
[TXT]jp_ESNMAG7.results.html2016-02-15 12:16 86KJPred results page
[TXT]jp_ESNMAG7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_ESNMAG7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_ESNMAG7.seq2015-04-17 15:03 212 Sequence data file
[TXT]jp_ESNMAG7.simple.html2015-04-17 15:09 1.4KBrief HTML: sequence and prediction only
[TXT]jp_ESNMAG7.svg.html2015-04-17 15:09 77KJalview SVG summary of results
[ ]jp_ESNMAG7.tar.gz2015-04-17 15:09 166KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.