JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d1crua_.name2015-04-17 17:46 0 Job name flag file
[ ]jp_IuXYRBD.input2015-04-17 17:46 455 Raw input data for analysis
[ ]jp_IuXYRBD.fasta2015-04-17 19:11 467 Input query sequence in FASTA format
[ ]jp_IuXYRBD.seq2015-04-17 17:46 467 Sequence data file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]jp_IuXYRBD.simple.html2015-04-17 19:20 2.5KBrief HTML: sequence and prediction only
[TXT]jp_IuXYRBD.coils.csv2015-04-17 19:20 2.7KCOILS output in CSV format
[TXT]LOG2015-04-17 19:22 4.7KJPred server log file
[TXT]jp_IuXYRBD.als2015-04-17 19:20 5.6KAlscript command file for PS/PDF output
[ ]jp_IuXYRBD.jalview2015-04-17 19:20 9.5KJalview annotation file for alignment
[TXT]jp_IuXYRBD.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_IuXYRBD.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_IuXYRBD.jnet2015-04-17 19:20 16KJnet secondary structure output
[ ]jp_IuXYRBD.coilseq.lupas_142015-04-17 19:20 19KCOILS output, window length 14
[ ]jp_IuXYRBD.coilseq.lupas_212015-04-17 19:20 19KCOILS output, window length 21
[ ]jp_IuXYRBD.coilseq.lupas_282015-04-17 19:20 19KCOILS output, window length 28
[TXT]jp_IuXYRBD.profile2015-04-17 19:16 71KPSIBLAST profile from alignment
[ ]jp_IuXYRBD.hmm2015-04-17 19:20 84KHHMer2 profile of the alignment
[ ]jp_IuXYRBD.pssm2015-04-17 19:20 96KPSIBLAST PSSM for Jnet
[TXT]jp_IuXYRBD.svg.html2015-04-17 19:22 172KJalview SVG summary of results
[TXT]jp_IuXYRBD.results.html2016-02-15 12:16 180KJPred results page
[ ]jp_IuXYRBD.align2015-04-17 19:20 446KPSIBLAST alignment in FASTA format
[ ]jp_IuXYRBD.concise.blc2015-04-17 19:20 447KBLC format prediction and alignment data
[ ]jp_IuXYRBD.concise.fasta2015-04-17 19:20 451KPrediction: coiled-coil, solvent, alignment
[TXT]jp_IuXYRBD.html2015-04-17 19:20 660KHTML prediction and alignment data
[ ]jp_IuXYRBD.concise2015-04-17 19:20 889KPrediction: coiled-coil, solvent, alignment
[ ]jp_IuXYRBD.concise.pdf2015-04-17 19:21 2.9MPDF prediction and alignment data
[TXT]jp_IuXYRBD.full_MSA.fasta.noGaps.html2015-04-17 19:22 3.1MFull MSA before JPred filters in FASTA
[ ]jp_IuXYRBD.blast.gz2015-04-17 19:17 17MCompressed PSIBLAST output file
[ ]jp_IuXYRBD.tar.gz2015-04-17 19:22 29MArchive containing complete results
[ ]jp_IuXYRBD.full_MSA.fasta2015-04-17 19:19 34MFull MSA before JPred filters in FASTA
[ ]jp_IuXYRBD.concise.ps2015-04-17 19:20 54MPrediction: coiled-coil, solvent, alignment
[TXT]jp_IuXYRBD.full_MSA.fasta.withGaps.html2015-04-17 19:22 93MFull MSA before JPred filters in FASTA
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.