JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:36 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1d0qa_.name2015-04-17 15:55 0 Job name flag file
[ ]jp_bfAgEx6.align2015-04-17 16:35 85KPSIBLAST alignment in FASTA format
[TXT]jp_bfAgEx6.als2015-04-17 16:36 2.3KAlscript command file for PS/PDF output
[ ]jp_bfAgEx6.blast.gz2015-04-17 16:35 2.0MCompressed PSIBLAST output file
[TXT]jp_bfAgEx6.coils.csv2015-04-17 16:35 642 COILS output in CSV format
[ ]jp_bfAgEx6.coilseq.lupas_142015-04-17 16:35 4.3KCOILS output, window length 14
[ ]jp_bfAgEx6.coilseq.lupas_212015-04-17 16:35 4.3KCOILS output, window length 21
[ ]jp_bfAgEx6.coilseq.lupas_282015-04-17 16:35 4.3KCOILS output, window length 28
[ ]jp_bfAgEx6.concise2015-04-17 16:35 166KPrediction: coiled-coil, solvent, alignment
[ ]jp_bfAgEx6.concise.blc2015-04-17 16:35 86KBLC format prediction and alignment data
[ ]jp_bfAgEx6.concise.fasta2015-04-17 16:35 87KPrediction: coiled-coil, solvent, alignment
[ ]jp_bfAgEx6.concise.pdf2015-04-17 16:36 533KPDF prediction and alignment data
[ ]jp_bfAgEx6.concise.ps2015-04-17 16:36 9.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_bfAgEx6.fasta2015-04-17 16:14 116 Input query sequence in FASTA format
[ ]jp_bfAgEx6.full_MSA.fasta2015-04-17 16:35 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_bfAgEx6.full_MSA.fasta.noGaps.html2015-04-17 16:36 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_bfAgEx6.full_MSA.fasta.withGaps.html2015-04-17 16:36 16MFull MSA before JPred filters in FASTA
[ ]jp_bfAgEx6.hmm2015-04-17 16:35 19KHHMer2 profile of the alignment
[TXT]jp_bfAgEx6.html2015-04-17 16:35 233KHTML prediction and alignment data
[ ]jp_bfAgEx6.input2015-04-17 15:55 109 Raw input data for analysis
[ ]jp_bfAgEx6.jalview2015-04-17 16:35 2.9KJalview annotation file for alignment
[ ]jp_bfAgEx6.jnet2015-04-17 16:35 3.8KJnet secondary structure output
[TXT]jp_bfAgEx6.profile2015-04-17 16:29 17KPSIBLAST profile from alignment
[ ]jp_bfAgEx6.pssm2015-04-17 16:35 22KPSIBLAST PSSM for Jnet
[TXT]jp_bfAgEx6.results.html2016-02-15 12:16 51KJPred results page
[TXT]jp_bfAgEx6.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_bfAgEx6.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_bfAgEx6.seq2015-04-17 15:55 116 Sequence data file
[TXT]jp_bfAgEx6.simple.html2015-04-17 16:35 1.2KBrief HTML: sequence and prediction only
[TXT]jp_bfAgEx6.svg.html2015-04-17 16:36 43KJalview SVG summary of results
[ ]jp_bfAgEx6.tar.gz2015-04-17 16:36 4.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.