JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:23 4.9KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1dd9a_.name2015-04-17 15:07 0 Job name flag file
[ ]jp_vzH3CUI.align2015-04-17 15:22 267KPSIBLAST alignment in FASTA format
[TXT]jp_vzH3CUI.als2015-04-17 15:22 4.8KAlscript command file for PS/PDF output
[ ]jp_vzH3CUI.blast.gz2015-04-17 15:20 7.1MCompressed PSIBLAST output file
[TXT]jp_vzH3CUI.coils.csv2015-04-17 15:22 1.8KCOILS output in CSV format
[ ]jp_vzH3CUI.coilseq.lupas_142015-04-17 15:22 13KCOILS output, window length 14
[ ]jp_vzH3CUI.coilseq.lupas_212015-04-17 15:22 13KCOILS output, window length 21
[ ]jp_vzH3CUI.coilseq.lupas_282015-04-17 15:22 13KCOILS output, window length 28
[ ]jp_vzH3CUI.concise2015-04-17 15:22 531KPrediction: coiled-coil, solvent, alignment
[ ]jp_vzH3CUI.concise.blc2015-04-17 15:22 268KBLC format prediction and alignment data
[ ]jp_vzH3CUI.concise.fasta2015-04-17 15:22 270KPrediction: coiled-coil, solvent, alignment
[ ]jp_vzH3CUI.concise.pdf2015-04-17 15:22 2.2KPDF prediction and alignment data
[ ]jp_vzH3CUI.concise.ps2015-04-17 15:22 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_vzH3CUI.fasta2015-04-17 15:07 327 Input query sequence in FASTA format
[ ]jp_vzH3CUI.full_MSA.fasta2015-04-17 15:21 11MFull MSA before JPred filters in FASTA
[TXT]jp_vzH3CUI.full_MSA.fasta.noGaps.html2015-04-17 15:23 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_vzH3CUI.full_MSA.fasta.withGaps.html2015-04-17 15:23 40MFull MSA before JPred filters in FASTA
[ ]jp_vzH3CUI.hmm2015-04-17 15:22 58KHHMer2 profile of the alignment
[TXT]jp_vzH3CUI.html2015-04-17 15:22 453KHTML prediction and alignment data
[ ]jp_vzH3CUI.input2015-04-17 15:07 317 Raw input data for analysis
[ ]jp_vzH3CUI.jalview2015-04-17 15:22 7.1KJalview annotation file for alignment
[ ]jp_vzH3CUI.jnet2015-04-17 15:22 11KJnet secondary structure output
[TXT]jp_vzH3CUI.profile2015-04-17 15:14 50KPSIBLAST profile from alignment
[ ]jp_vzH3CUI.pssm2015-04-17 15:22 67KPSIBLAST PSSM for Jnet
[TXT]jp_vzH3CUI.results.html2016-02-15 12:16 136KJPred results page
[TXT]jp_vzH3CUI.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_vzH3CUI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_vzH3CUI.seq2015-04-17 15:07 327 Sequence data file
[TXT]jp_vzH3CUI.simple.html2015-04-17 15:22 2.1KBrief HTML: sequence and prediction only
[TXT]jp_vzH3CUI.svg.html2015-04-17 15:23 128KJalview SVG summary of results
[ ]jp_vzH3CUI.tar.gz2015-04-17 15:23 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.