JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:28 4.7KJPred server log file
[TXT]README2016-02-15 12:16 2.1KResults file descriptions
[TXT]d1e58a_.name2015-04-17 15:56 0 Job name flag file
[ ]jp_cpH9EDF.align2015-04-17 16:27 195KPSIBLAST alignment in FASTA format
[TXT]jp_cpH9EDF.als2015-04-17 16:27 3.7KAlscript command file for PS/PDF output
[ ]jp_cpH9EDF.blast.gz2015-04-17 16:25 14MCompressed PSIBLAST output file
[TXT]jp_cpH9EDF.coils.csv2015-04-17 16:27 1.5KCOILS output in CSV format
[ ]jp_cpH9EDF.coilseq.lupas_142015-04-17 16:27 10KCOILS output, window length 14
[ ]jp_cpH9EDF.coilseq.lupas_212015-04-17 16:27 10KCOILS output, window length 21
[ ]jp_cpH9EDF.coilseq.lupas_282015-04-17 16:27 10KCOILS output, window length 28
[ ]jp_cpH9EDF.concise2015-04-17 16:27 388KPrediction: coiled-coil, solvent, alignment
[ ]jp_cpH9EDF.concise.blc2015-04-17 16:27 196KBLC format prediction and alignment data
[ ]jp_cpH9EDF.concise.fasta2015-04-17 16:27 198KPrediction: coiled-coil, solvent, alignment
[ ]jp_cpH9EDF.concise.pdf2015-04-17 16:27 1.3MPDF prediction and alignment data
[ ]jp_cpH9EDF.concise.ps2015-04-17 16:27 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_cpH9EDF.fasta2015-04-17 16:15 263 Input query sequence in FASTA format
[ ]jp_cpH9EDF.full_MSA.fasta2015-04-17 16:26 29MFull MSA before JPred filters in FASTA
[TXT]jp_cpH9EDF.full_MSA.fasta.noGaps.html2015-04-17 16:28 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_cpH9EDF.full_MSA.fasta.withGaps.html2015-04-17 16:28 86MFull MSA before JPred filters in FASTA
[ ]jp_cpH9EDF.hmm2015-04-17 16:27 46KHHMer2 profile of the alignment
[TXT]jp_cpH9EDF.html2015-04-17 16:27 358KHTML prediction and alignment data
[ ]jp_cpH9EDF.input2015-04-17 15:56 254 Raw input data for analysis
[ ]jp_cpH9EDF.jalview2015-04-17 16:27 5.8KJalview annotation file for alignment
[ ]jp_cpH9EDF.jnet2015-04-17 16:27 9.0KJnet secondary structure output
[TXT]jp_cpH9EDF.profile2015-04-17 16:22 40KPSIBLAST profile from alignment
[ ]jp_cpH9EDF.pssm2015-04-17 16:27 53KPSIBLAST PSSM for Jnet
[TXT]jp_cpH9EDF.results.html2016-02-15 12:16 109KJPred results page
[TXT]jp_cpH9EDF.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_cpH9EDF.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_cpH9EDF.seq2015-04-17 15:56 263 Sequence data file
[TXT]jp_cpH9EDF.simple.html2015-04-17 16:27 1.7KBrief HTML: sequence and prediction only
[TXT]jp_cpH9EDF.svg.html2015-04-17 16:28 101KJalview SVG summary of results
[ ]jp_cpH9EDF.tar.gz2015-04-17 16:28 24MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.